Pseudomonas chlororaphis subsp. aurantiaca: JM49_00860
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Entry
JM49_00860 CDS
T03338
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JM49_00860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcp02044
]
JM49_00860
Secretion system [BR:
pcp02044
]
Type VI secretion system
Imp/Vas secretion system core components
JM49_00860
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
HalOD2
Motif
Other DBs
NCBI-ProteinID:
AIS10262
UniProt:
A0AAJ1E2U6
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All DBs
Position
186780..187787
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AA seq
335 aa
AA seq
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MDTTYGSTAPALSGLTRVIREYSLFQAVLLVVDRLRDSHPGLSEEDLYDQLEFQANPSLG
FPGSDVDRVEFFEEHGQMRARLRFNLIGLFGSGSPLPAFYGEQALGDSEDGNPTRNFLDL
FHHRLQRLMLPIWRKYRYRASFKSGALDPFSAQLFALIGLGGEDIRKAKELNWKRLLPYL
GLLSLRAHSAALIEAVLRYYFKHADLVIEQCIERRVEILEEQRNRLGRANSQLGEDLVLG
ERVRDRSGKFRIHIRQLDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI
RELRIGEQNACRLGWTSWLGRERADGVVTLGSKIH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgtatgggtctacagcccctgctttaagcgggctgacccgggtcatccgc
gagtactcgctgttccaggccgtgctgctggtggtggaccggctgcgcgattcccatccg
ggcctgagcgaagaggatctctacgaccagctggaattccaggccaatccgagcctgggt
ttccctggcagcgacgtcgatcgcgtggagtttttcgaagagcacgggcagatgcgcgcg
cgcctgcgcttcaacctgatcgggctgttcggctccggctcgccgctgccggcgttctac
ggtgagcaggccctgggcgacagcgaggacggcaacccgacccgcaacttcctcgacctg
ttccaccatcgcctgcagcggctgatgctgccgatctggcgcaagtaccgctaccgcgcc
agcttcaagagtggcgcgctcgacccgttttccgcccagctgttcgccctgatcggcctc
ggcggcgaggacatccgcaaggccaaggaactgaactggaagcgcctgctgccgtacctc
ggcctgctcagcctgcgggcccactcggcggcgctgatcgaggccgtgctgcgctactac
ttcaagcatgccgacctggtgatcgagcagtgcatcgagcgtcgggtggagattctcgaa
gagcagcgcaaccgcctgggccgcgccaacagccagctcggcgaagacctggtgctgggc
gagcgggtgcgcgaccgcagcggcaagttccgcatccatatccgccagctcgactggcaa
cgcttccacgagttcctgccgatcggtttcggctaccagccgctgtgtgcgctggtgcgg
ttcaccctgcgtgacccgctggactacgacattcgcctggtcctgcgccaggaagaaatc
cgcgaactgcgcatcggtgagcagaacgcctgtcgcctcgggtggaccagttggctcggc
cgcgaacgcgcggacggcgtggtgaccctgggcagcaaaattcattaa
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