KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_00885
Entry
JM49_00885        CDS       T03338                                 
Name
(GenBank) type VI secretion protein
  KO
K11906  type VI secretion system protein VasD
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_00885
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_00885
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_00885
SSDB
Motif
Pfam: T6SS-SciN LPAM_1
Other DBs
NCBI-ProteinID: AIS10267
LinkDB
Position
193433..193933
AA seq 166 aa
MSRCSTLLSKTLAVLTALALLAGCSSLSPYSTMTKLNLKLTASDQLNPDLNGRPSPIVVR
LIELKHPVAFENADFFSLYERAKESLALDMVASEELELRPGETVELKLSVEEGSRYVGVL
AAYRDLSETQWRYVVQLTPVELTEADLTLDQAGIRTSNATLAKADK
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtctcgctgctcgaccctgttatccaagacgctggctgtgctgactgccctggcgttg
ctggccggctgctcgtcgctgtcgccgtactcgaccatgaccaagctcaacctcaagctg
accgccagcgaccagctcaacccggacctcaacggtcgcccctcgccgatcgtggtgcgg
ttgatcgaactcaagcatccggtggccttcgagaacgccgacttcttcagcctctacgag
cgcgccaaggagtcgctggcactggacatggtggccagcgaagaactggaactacgcccg
ggtgaaaccgtggaactcaagctcagcgtcgaagaaggcagccgctacgtcggcgtgctg
gcggcctaccgcgacctgtcggaaacccagtggcgctatgtggtgcagctcactccggtg
gagctgaccgaagccgacctgaccctcgaccaggccggtatccgcaccagcaacgcaacg
ctcgccaaggcggataagtaa

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