Pseudomonas chlororaphis subsp. aurantiaca: JM49_01280
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Entry
JM49_01280 CDS
T03338
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00300
Lysine biosynthesis
pcp00470
D-Amino acid metabolism
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
pcp01120
Microbial metabolism in diverse environments
pcp01230
Biosynthesis of amino acids
Module
pcp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JM49_01280
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JM49_01280
Enzymes [BR:
pcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JM49_01280
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIS10345
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Position
complement(279797..281044)
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AA seq
415 aa
AA seq
DB search
MDAFNYRDGQLFAEGVALSAIAERFGTPTYVYSRAHIEAQYHAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGAADKIVFSGVGKTRDDMRHALEVGVH
CFNVESSDELERLQQVAAELNVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVVGVDCHIGSQLTTLAPFIDALDRLLDLVDRLGECGIYLRHIDLGGGL
GVRYRDEEPPLAADYVKAVRERLDGRDLELVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSAVRPRDGQARTYDIVGPICETGDFLAKERQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGEQAVEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgcgacgggcagctgttcgcggaaggtgtagcgttgtccgcc
attgccgaacgttttggcacgccgacctacgtctattcccgagcgcatatcgaagcgcag
taccacgcgtacgccgatgccctcgccggcatgccgcacctggtctgcttcgcggtaaag
gccaactccaacctgggtgtactgaatgtcctggcgcgtctgggcgccggtttcgacatc
gtctcccgcggcgagctggaacgcgtcctggcagctggcggcgcggccgacaagatcgtc
ttctccggtgtcggcaagacccgtgacgacatgcgtcacgccctggaagtcggcgtgcac
tgcttcaacgtcgaatccagcgacgagctggagcgcctgcaacaggtcgccgccgaactg
aacgttcgcgcgccggtctcgctgcgggtcaacccggatgtcgacgcgggcacccacccg
tacatttccaccggcctgaaggaaaacaagttcggcatcgccatcgccgatgccgaagac
gtgtacatccgcgcggcccagttgccgaacctggaagtggtcggcgtcgactgccatatc
ggctcgcaactgaccaccctggcccccttcatcgatgccctcgaccgtctgctggacctg
gtcgaccgcctgggcgaatgcggcatctacctgcgccacatcgacctcggtggcggcctg
ggcgtgcgttatcgcgatgaagagccgccgctggccgccgactacgtcaaggccgtgcgc
gaacgcctcgacggccgcgacctggagctggtcttcgaacccggccgcttcatcgtcgcc
aacgccggggtactgctgacccgggtcgagtacctcaagcacaccgaacacaaggacttc
gccatcgtcgacgcggcaatgaacgacctgatccgcccggccctgtaccaggcctggatg
gacgtcagcgccgtacgcccgcgcgatggccaggcccgcacctacgacatcgtcggcccg
atctgcgaaaccggcgacttcctggccaaggaacgtcagctggcgctggaagaaggcgac
ctgctggccgtgcattcggccggtgcctacggtttcgtcatgagctccaactacaacacc
cgcgggcgcgctgctgaagtgctggtcgatggtgaacaggctgttgaagtgcgtcgccgc
gagacggtagccgagttgtttgctggcgaaagcctgctgccggagtag
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