Pseudomonas chlororaphis subsp. aurantiaca: JM49_02060
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Entry
JM49_02060 CDS
T03338
Name
(GenBank) RNA polymerase sigma 70
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcp03021
]
JM49_02060
Transcription machinery [BR:
pcp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JM49_02060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
AIS10495
LinkDB
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Position
446690..447544
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWTDNSTSNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgccttggtcccgggtgcgaacctggaggcctat
gtgcacacggtgaacagcattccattgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatcttgaggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctattccggctacggtctggcccaggccgacctgatt
caggaaggcaacgtcggcctgatgaaggctgtaaaacgcttcaacccggaaatgggtgtg
cgtctggtttcgttcgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcatcgtgaaagtcgcgaccaccaaggcccaacgcaagctgttcttcaacctg
cgcagccagaagaagcgcctggcctggttgaacaacgaagaagtccaccgtgtggcggaa
agcctcggtgtggagccgcgcgaagtgcgcgagatggaaagccgcctgaccggccatgac
atggccttcgacccagccgccgaagcggatgacgacagcgccttccaatcgccggccaac
tacctggaagaccaccggtacgatccggcccgtcagcttgaagacgccgactggaccgac
aactccaccagcaatctgcacgaagcgctggaagtgctggacgaccgcagccgcgacatc
ctctaccagcgctggctggcggaagagaaagccacgctgcatgacctggcgcagaagtac
aacgtctcggccgagcgtatccgtcagcttgagaagagcgcgatgaacaagctcaagctg
tcgattgccgcgtaa
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