Pseudomonas chlororaphis subsp. aurantiaca: JM49_02755
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Entry
JM49_02755 CDS
T03338
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00260
Glycine, serine and threonine metabolism
pcp00460
Cyanoamino acid metabolism
pcp00630
Glyoxylate and dicarboxylate metabolism
pcp00670
One carbon pool by folate
pcp00680
Methane metabolism
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
pcp01120
Microbial metabolism in diverse environments
pcp01200
Carbon metabolism
pcp01230
Biosynthesis of amino acids
pcp01240
Biosynthesis of cofactors
pcp04981
Folate transport and metabolism
Module
pcp_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JM49_02755 (glyA)
09102 Energy metabolism
00680 Methane metabolism
JM49_02755 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JM49_02755 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JM49_02755 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JM49_02755 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JM49_02755 (glyA)
Enzymes [BR:
pcp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JM49_02755 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AIS10629
UniProt:
A0AAJ1E341
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All DBs
Position
603435..604688
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIENAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVELAGWICDILDHLGDADVEANVARQVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccaaatccagggttatgacgatgcactgctggcggccatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aagcgtgtgatgcaagcgcaaggcagcggcctgaccaacaagtacgccgaaggttatccg
ggcaagcgctactacggtggctgcgagcacgtggacaaggtcgaggccctggccatcgag
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtgtacctggccctgctgcaagccggcgacaccattctgggcatgagc
ctggcccatggcggccacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccaacaccgggctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgttgccggtttctcggcctactccaag
accctcgacttcccacgtttccgccagatcgcggacaaggtcggcgcctatctctttgtc
gacatggcccacgtcgccggtctggtcgccgctggcctgtacccgaacccgctgccttac
gccgacgtggttaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaaggccaacgaagaaatcgagaagaagctcaacgccgcggtattccctggcgcc
cagggcggcccgctgatgcacgtgatcgccggcaaggcggtgtgcttcaaggaagcgctg
gagcctggcttcaaggcctaccagcagcaagtgatcgagaacgcccaggccatggccggc
gtatttatcaaacgcggctacgatgtagtgtccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctcaccggcaaggatgcggacgccgccctggggcgcgcc
catatcaccgtgaacaagaacgctgtcccgaacgatccacagtcgccgttcgtgacctcc
ggcctgcgtatcggcaccccggcggtgaccacccgcggcttcaaggttacccagtgcgtg
gagctggccggctggatctgcgacatcctcgaccacctcggcgacgccgatgtcgaggcc
aatgtcgcccgtcaggtgtcggccctgtgcgcggacttcccggtttatcgctga
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