Pseudomonas chlororaphis subsp. aurantiaca: JM49_03815
Help
Entry
JM49_03815 CDS
T03338
Name
(GenBank) geranyl transferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00900
Terpenoid backbone biosynthesis
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JM49_03815
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcp01006
]
JM49_03815
Enzymes [BR:
pcp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JM49_03815
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JM49_03815
2.5.1.29 geranylgeranyl diphosphate synthase
JM49_03815
Prenyltransferases [BR:
pcp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JM49_03815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AIS10828
UniProt:
A0AAJ1E463
LinkDB
All DBs
Position
complement(827639..828526)
Genome browser
AA seq
295 aa
AA seq
DB search
MIAAYQASSQARVNAALETLFHAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGA
RPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLSDSSAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHK
TGALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAGAEPLRELARYIVERRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggcctatcaggccagcagtcaggcccgggtcaatgctgcactggaaaccctg
ttccacgcgccaagcccggagctggcccgtctttacgaggccatgcgctacagcgtgatg
aacggcggcaagcgcgtacgcccgctgctggcctacgccgcctgcgaagccctcggcgcc
cggccggagcaggccaacggcgcggcctgcgcggtggagctgatccacgcctattccctg
gtgcacgacgatttgccagcgatggacgacgacgacctgcgtcgcggccagccgaccacc
cacaaagccttcgatgaagcctgcgcgattctcgccggcgacggtttgcagagcctggcc
ttcagcgccctgctcgacccgcgcctgagcgattcgagcgccgagatccgcctgcagatg
gtcagcgccctggcgctggcggcgggcccggcgggcatggtcggcggccaggccatcgac
ctcggttcggtgggcctcaagctcgaccagaaagccctggaatacatgcaccggcacaag
accggcgcgctgatcgaggccagcgtcaagctcggcgccctggccagcggccgggccgag
aaagacgaactcaagtccctgcagacctatgcccaggccatcggcctggccttccaggtg
caggacgacattctcgacgtggaaagcgataccgcgaccctcggcaaacgccagggagcc
gacatcgcgcgggacaaaccgacctacccggccctgctcggcctggaagcggccaaggcc
tatgccctggagctgcgcgatcaggccctgcacgcactgcgaccctttgacgcgggcgcc
gagcccctgcgggagctggcgcgttatatcgtcgaacgacgcagttga
DBGET
integrated database retrieval system
