Pseudomonas chlororaphis subsp. aurantiaca: JM49_03820
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Entry
JM49_03820 CDS
T03338
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JM49_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_03820
Enzymes [BR:
pcp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JM49_03820
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JM49_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
AIS10829
UniProt:
A0AAJ1E4U5
LinkDB
All DBs
Position
complement(828523..828765)
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AA seq
80 aa
AA seq
DB search
MARKKAALDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIGLTRDCQAALAQAEQKVQ
ILLERDGELAEEPFDAEQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagctgccttagatttcgaacaatccctcgccgacctgcaaacgctg
gtcgagcgtctggagaacggcgagctgtcgctggaagactcgttgaccgccttcgagcaa
ggcatcggcctgacccgcgattgccaggcggcgctggcccaggccgagcagaaggtgcag
atcctgctggagcgcgatggcgagctggccgaagaacccttcgacgcggaacagccagaa
tga
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