Pseudomonas chlororaphis subsp. aurantiaca: JM49_03915
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Entry
JM49_03915 CDS
T03338
Name
(GenBank) nucleoid-structuring protein H-NS
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00360
Phenylalanine metabolism
pcp00362
Benzoate degradation
pcp00622
Xylene degradation
pcp01100
Metabolic pathways
pcp01120
Microbial metabolism in diverse environments
pcp01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
JM49_03915
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JM49_03915
00622 Xylene degradation
JM49_03915
00621 Dioxin degradation
JM49_03915
Enzymes [BR:
pcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
JM49_03915
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AIS10847
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All DBs
Position
846670..847698
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AA seq
342 aa
AA seq
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MNNVKIIDVTLRDGGYRNNFEFTTDYAANAVGHLVDVGVGHAEIGYCNGSFIRKKEHGLS
SSVSPEYIESLRRAARGQLGLCVMVHPRNVTGEDFEMLAEHGVGMIRVCLRAEQLEQGVA
TIELAKSFNFQASANITHITTQTPGTVTDMALRAEGAGADVIYFADSNGNMIPDDVERLV
SRISRRVHVPLGFHAHNNLSLALSNSIAAVEAGAEYIDTSICGMGKGAGNLHLGMFIAYL
ERVGSANGYDLVKALQLSEYTAQSVPLSSLPTPLMDVMLGAYNLPFDVQQRLEDTMSRLQ
ISSTFQALRAMHEQDLIQRHAVRPLVISRSSFPAHLSAEGKM
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgtaaagattattgatgtaacgctccgtgatggtggttatcgtaacaacttc
gagttcactaccgattatgccgccaatgccgtcgggcaccttgtcgacgtgggggttggg
catgccgagatcggttattgcaatggttctttcatacgcaagaaagaacacggactgagc
agttcggtcagccctgaatatattgaatcgctgcgtcgtgccgcacgcggtcaactaggg
ctgtgtgtcatggtgcatccgcgtaatgtgacgggcgaagactttgaaatgctcgccgaa
catggcgtcggaatgatccgggtgtgtttgcgtgccgagcaacttgaacaaggcgtggca
actatcgagttggccaagtcgttcaactttcaggccagcgccaatatcacccatatcacc
acgcaaacaccgggaaccgtgacggatatggcattgcgcgcggaaggcgccggggccgat
gtcatttattttgccgactctaatggcaatatgattccggatgatgtcgaacggctagtc
agtcggatatccagaagagtccatgtgcccctggggttccacgcgcacaataatctttcc
ctggcgctttccaactccatcgcggccgtcgaggccggtgccgaatatatcgacacttcg
atttgcggcatgggcaagggcgcgggcaacttgcacctgggcatgtttatcgcctatctg
gagcgggtcggaagtgccaatggctacgacttggtcaaggccctgcagttgtccgaatac
accgcgcagagcgttccactgagcagcctgccgaccccgctcatggatgtgatgctgggt
gcctacaacttgcctttcgatgttcagcagcggctggaggacaccatgtcccggctgcag
atcagctcgacattccaggcgctccgggcgatgcacgagcaggacctgatccagcggcac
gcggtacgaccgctggtgatttcccggtccagcttcccggctcatctgtccgccgaagga
aaaatgtga
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