Pseudomonas chlororaphis subsp. aurantiaca: JM49_04055
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Entry
JM49_04055 CDS
T03338
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JM49_04055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_04055
Enzymes [BR:
pcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JM49_04055
DNA repair and recombination proteins [BR:
pcp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JM49_04055
Prokaryotic type
JM49_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
DUF6412
PGM_PMM_III
Motif
Other DBs
NCBI-ProteinID:
AIS10875
LinkDB
All DBs
Position
complement(874680..875366)
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AA seq
228 aa
AA seq
DB search
MSILSTPTLPKALPDSFFDRDAQVLARELLGKIIRHRVGDLWLSARIIETEAYYCEEKGS
HASLGYTEKRKALFLDGGHIYMYYARGGDSLNFSAQGPGNAVLIKSAYPWVDEISGPASL
AQMLLNNPDASGRPRPSQKLCAGQTLLCKALGLKVPVWDAKRFDHEVLFVEDVGTPVASV
IQTTRLGIPHGRDEHLMYRFVDAAYAPYCTRNPLRRGQVEGRDYLLLD
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgtccactccgacgctgcccaaggccctgcccgacagctttttcgatcga
gacgcccaggtcctggcccgtgaactgctcggcaaaatcatccgccatcgggtcggcgat
ctgtggctgtcggcgcgcattatcgaaacagaagcctattactgcgaggaaaaaggcagc
catgcctccctcggctacacagaaaagcgtaaggctttgtttctggacggtggccacatc
tatatgtactacgcccgcggcggcgactcgctgaacttcagcgcccaggggccgggcaac
gcggtgctgatcaagtcggcctacccctgggtcgacgaaatctcgggccccgccagcctg
gcgcagatgctcctgaacaatcccgacgccagcggccggccgcgcccctcgcagaagctc
tgcgccggccagaccctgctgtgcaaggcactgggcctgaaagtcccggtgtgggatgcc
aagcgcttcgaccatgaagtgctgttcgtcgaggatgtcggcacgcccgtcgccagcgtc
atccagaccacccgcctgggcatccctcacggccgcgatgagcacttgatgtaccgcttt
gtcgacgctgcctacgccccctactgcacccggaacccgctacgtcgcgggcaggtcgaa
ggtcgcgactatttgctgctcgattga
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