Pseudomonas chlororaphis subsp. aurantiaca: JM49_04225
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Entry
JM49_04225 CDS
T03338
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcp03009
]
JM49_04225
Enzymes [BR:
pcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
JM49_04225
Ribosome biogenesis [BR:
pcp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JM49_04225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
DUF8666
Motif
Other DBs
NCBI-ProteinID:
AIS10909
LinkDB
All DBs
Position
911445..912086
Genome browser
AA seq
213 aa
AA seq
DB search
MSRPPRPASRRPGVKSPSSSSAPRRVAKAPPAEPKLILFNKPFDVLTQFSDGEGRATLKD
FIAIPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPRHKLAKTYWVQVEGEPTAEQLQRL
RDGVELNDGMTLPAEARQLEEPQLWPRNPPVRFRKSVPTSWLELIIREGRNRQVRRMTAA
VGLPTLRLVRVRIGDWTIEGLDQGQWKEVPARL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcctccgcgtcccgcttcccgccgccctggcgtgaagagtccttcgtcttcc
tctgcgccgcgccgagttgccaaagcgccaccggccgagccgaaactgatcctgttcaac
aaacccttcgatgtgctgacccagttcagcgatggcgaagggcgggcgaccctcaaggac
ttcatcgcgatacccggcatctacccggccggtcgcctcgaccgcgacagcgaaggcttg
ctgctgctgaccaacgacggccagttgcaggcgcgcatcgccgaccccaggcacaagctg
gccaagacctattgggtgcaggtggaaggcgagcccacggccgagcaattgcagcgtctg
cgcgatggcgtggaattgaatgacggcatgaccctgccggccgaagcccggcagctggag
gagccgcagctgtggccgcgcaacccgccggtgcgctttcgcaagagcgtgcccaccagc
tggctggagttgatcattcgtgaagggcgcaatcgccaggtgcggcgcatgacggctgcc
gtgggtttgccgacattgcgcctggtgcgggtcaggatcggtgactggacgatcgagggg
ctcgatcagggccagtggaaggaggttccggcgcgtttataa
DBGET
integrated database retrieval system
