Pseudomonas chlororaphis subsp. aurantiaca: JM49_04280
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Entry
JM49_04280 CDS
T03338
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03030
DNA replication
pcp03430
Mismatch repair
pcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JM49_04280
03430 Mismatch repair
JM49_04280
03440 Homologous recombination
JM49_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcp03032
]
JM49_04280
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_04280
Enzymes [BR:
pcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JM49_04280
DNA replication proteins [BR:
pcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JM49_04280
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JM49_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIS10920
LinkDB
All DBs
Position
921884..922495
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPPAEQVMNEVNEFVGTTPLLAHNAAFDQKFWDYELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFASLPHTGQAHRAMADAEMAANLTAHLALELRQKHGLRELSHD
FLCKLQKVPAAKIGEHLKRHRGA
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatcgcagtcatcgactttgaaaccaccgggatctccccgagcagcagttgc
cgggccacggaaattgccgtggtgatccttgagcaggggcgcatcgtcgagcgttaccag
agcctgatgaatgccggcgtgcgggtgccggccttcatcgaacagctgaccggcattagc
aacgccatgctgcgcagcgcgccgccggccgagcaggtgatgaacgaggtcaacgagttc
gtcggcaccacgccgctgctggcgcacaacgcagcgttcgaccagaagttctgggactac
gaactgggccggatcaagcgcacccgcttgcagaacttcgcctgttccctgttgctggcg
cggcgcctgatgccggcggcgcccaaccacaagctcggcaccctgaccacgttcgccagc
ctgccccataccggccaggctcaccgggccatggccgacgcggaaatggccgccaacctc
accgcgcacctggcgctggagctgcggcagaaacacgggctgcgtgagctgtcccacgac
ttcctgtgcaaattgcagaaagtgccggccgccaagatcggcgaacacctcaagcgccat
cgcggcgcctga
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