Pseudomonas chlororaphis subsp. aurantiaca: JM49_04520
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Entry
JM49_04520 CDS
T03338
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_04520
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JM49_04520
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
AAA
GvpD_P-loop
RecA
SLFN-g3_helicase
AAA_24
Rad51
nSTAND3
DUF7125
AAA_14
NTPase_1
MCM
ABC_tran
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AIS10965
UniProt:
A0AAJ0ZPK2
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All DBs
Position
980563..981930
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AA seq
455 aa
AA seq
DB search
MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLTETMVESGGAAAPSGRTGWAGQQAQIK
TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARQEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEPPPGLRIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggcgcaacctttcccaaatgg
gccggccagtgcggcgaatgcggagcctggaacaccctgaccgaaaccatggtggaaagc
ggcggcgccgcggcccccagcggtcgcaccggctgggccgggcagcaggcgcagatcaag
accctggccgaggtcagcgtcgaagaaattccacgcttttccacggcttccggcgaactg
gaccgggtgctcggtggcggtctggtcgacggttcggtggtgctgatcggcggcgacccg
gggatcggcaagtcgaccattctgctgcagaccttgtgcaacatcgccacccgcatgccg
gcgctctacgtcaccggcgaagaatcgcagcaacaggtggcgatgcgtgcccggcgcctg
ggcctgccccaggaccagctacgggtgatgaccgaaacctgtatcgaaaccatcatcgcc
acggcccggcaggagaagcccaaggtcatggtgatcgactcgatccagaccatcttcacc
gagcaactgcaatcggcccccggcggggtttcccaggtgcgcgaaagcgcggcgctgctg
gtgcgctacgccaagcagagcggcacggcgatcttcctggtgggccacgtgaccaaggag
ggcgcgctggccgggccgcgggtcctcgagcatatggtcgacaccgtgctgtatttcgaa
ggtgagtccgacggccgcctgcgcttgctgcgggcggtgaagaaccgcttcggcgcggtc
aacgagctgggcgtgttcggcatgaccgatcgcggcctgaaagaggtttccaacccgtcg
gcgatctttctcacccgtgcccaggaagaagtcccgggcagcgtggtcatggccacctgg
gaaggcacccggccgatgctggtggaagtccaggcgctggtggatgacagccacctggcc
aatccgcggcgggtcaccctgggcctggaccagaaccgcctggcgatgctgctggcggtg
ctgcaccgccatggcggtattccgacccacgatcaggacgtgttcctcaatgtggtcggc
ggggtcaaggtgctggaaaccgcgtccgacctggcgctgatggcggcggtgatgtccagc
ctgcgcaaccggcccttgccccacgatctactggtgttcggcgaagtcggcctgtccggc
gaagtacgcccggtgccgagcggccaggagcgcctcaaggaggcggccaaacacggtttc
aaacgggccatcgtgcccaagggcaatgccccgaaagagccgccaccgggcttgcggatc
attgcggtaacccgtctggaacaggcgctggatgcgctgttcgaatga
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