Pseudomonas chlororaphis subsp. aurantiaca: JM49_04890
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Entry
JM49_04890 CDS
T03338
Name
(GenBank) polysaccharide biosynthesis protein
KO
K20987
polysaccharide biosynthesis/export protein PslD
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JM49_04890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_04890
Transporters [BR:
pcp02000
]
Other transporters
Pores ion channels [TC:
1
]
JM49_04890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Poly_export
SLBB_2
SLBB
Rng_hyd_C
Motif
Other DBs
NCBI-ProteinID:
AIS11035
LinkDB
All DBs
Position
complement(1060350..1061150)
Genome browser
AA seq
266 aa
AA seq
DB search
MMTINRPSRLCLLSILTASLWLGGCSTPAHVALPDGDTLKARHAAALTLADLPPAQVLIQ
SGDTLRIVRDAQEPASSDDMTMFVVRPDGFISMPNIGRIKAALLTPEDLGKEITKRYTRV
YREPEVTVNIAIAPSNRVFIGGAVANPSFFNLAGTVSVEQALLSSGGVLPSADSTNIALL
RTGPDGKYKMYFVDLSSMLSNPDHPLVALQRGDLIYVPQSTIGSTVEAVDMYFTKLFPVN
KGIGVGFNYDLNQQDVKVQNPNPALP
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgatgactattaaccgaccctcccggctttgtctgttgagcatcctgaccgcctccctg
tggctgggcggctgctcgacccccgcgcatgtcgcgctccccgacggcgataccctcaag
gcccgccacgcggcggcactgaccctggccgacctgccgcccgcccaggtgctgatccag
agcggcgacaccctgcgcatcgtgcgcgatgcccaggagccggccagctccgacgacatg
acgatgttcgtggtgcgcccggacggtttcatctcgatgcccaacatcggtcggatcaag
gccgcgctgctgaccccggaagacctgggcaaggaaatcaccaagcgctacacgcgcgtc
taccgcgagcccgaagtgaccgtgaacattgccattgccccgagcaaccgggtgttcatc
ggcggcgcggtggccaacccgtcgttcttcaacctcgccggaaccgtgtcggtggagcag
gccctgctcagctccggcggcgtcctgccatcggctgacagcaccaatatcgccctgctc
aggaccggccccgacggcaagtacaagatgtacttcgtcgacctcagcagcatgctcagc
aaccccgatcatccgctggtcgccctgcagcgcggcgacctgatctacgtgccgcaatcg
accatcggcagcacggtggaagcggtggacatgtacttcaccaagctgttcccggttaac
aaagggattggtgttggcttcaactacgacctgaaccaacaggatgtaaaggtacaaaac
ccgaatccagcactcccatag
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