Pseudomonas chlororaphis subsp. aurantiaca: JM49_04940
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Entry
JM49_04940 CDS
T03338
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcp02044
]
JM49_04940
02035 Bacterial motility proteins [BR:
pcp02035
]
JM49_04940
Secretion system [BR:
pcp02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
JM49_04940
Bacterial motility proteins [BR:
pcp02035
]
Pilus system
Pilus assembly proteins
JM49_04940
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
MIP-T3_C
DUF2663
Motif
Other DBs
NCBI-ProteinID:
AIS11045
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Position
complement(1068553..1069770)
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AA seq
405 aa
AA seq
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MAVKAAKVSVYLWEGTDRQGSKLRGELSGHTPSLIRAQLRKQGISPARVRKKSSSPFQRT
PPIKARDISLFTRQLATLIKAGVPLLQSFDIIAEGFDNPNMRKLLGELKQDIAAGSSFTS
ALRKRPRYFDELYCSLVDAGEQAGALETLLERVATYKEKSENLKTRIRKAMTYPLAVICV
ALVVTGILLVKVVPQFQSMFQGFGAQLPVFTQLVIALSEFVQHWWWLLAGALLLSVFGLR
HAHRRSPRFRHWLDAGLLKLPLVAPLLYKSAVARYARTLSTTFAAGVPLVEALGSVAGAT
GNQVFKHAVNRIRQDVATGMQLHFSMRASGIFPGMAIQMTAIGEESGALDGMLEKVAIHY
EEEVDTLVDTLSSLMEPVIMVVLGTLVGGLVVAMYLPIFQLGTAI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaaagcagcaaaagtcagtgtttacctgtgggaaggcaccgacaggcaaggc
agcaaactgcgcggcgaattgagcggccataccccctcgctgatcagggcccagttgcgc
aagcaaggcatcagcccggccagggtcaggaagaaatccagctcgccgttccagcgcaca
cctccgatcaaggcccgcgacatcagcctgttcacccgacagctggcgaccctgatcaag
gccggcgtaccgctgctgcaatcgttcgacatcattgccgagggcttcgataacccgaac
atgcgcaaactgctgggcgagctgaaacaggacatcgccgccggcagcagcttcaccagc
gcactacgcaagaggccgcggtatttcgacgagctgtactgcagcctggtggatgccggc
gagcaggccggcgccctggaaaccctgctggagcgggtggcgacctacaaggaaaaaagc
gaaaacctcaagacccgaatccgcaaggccatgacctatcccctggcggtgatctgtgtg
gcgctggtggtcacggggatcctgctggtcaaggtggtgccgcaattccagtcgatgttc
caaggctttggcgcgcaactgccggtattcacccaactggtcatcgccctctcggaattc
gtgcagcactggtggtggctgctggcgggagctctgttgctcagtgtgttcggcctgcgc
catgcccaccggcgctcaccgcgctttcgccactggctggacgcgggcctgctgaaactg
ccgttggtggcgccgctgctgtacaagtccgcggtggcccgctacgcccgcaccttgtcc
accaccttcgccgccggggtaccgctggtggaggccctgggctcggtggccggggccacc
ggcaaccaggtgttcaagcatgcggtgaaccgcatcaggcaggacgtggcgaccggcatg
cagttgcacttttccatgcgcgcgtccggcatttttcccggcatggccatccagatgacc
gccatcggcgaagaatccggggccctggacggcatgctggaaaaagtcgcgatccactac
gaggaagaggtcgataccctggtcgataccctgagcagtctcatggagcccgtgatcatg
gtagttttgggcaccctcgtcggcggcctggtggtcgccatgtacttacccatcttccaa
ctcggcacagcgatctga
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