Pseudomonas chlororaphis subsp. aurantiaca: JM49_05235
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Entry
JM49_05235 CDS
T03338
Name
(GenBank) Short chain fatty acid transporter
KO
K02106
short-chain fatty acids transporter
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JM49_05235
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GFIT
Motif
Pfam:
SCFA_trans
DcuC
Motif
Other DBs
NCBI-ProteinID:
AIS11099
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Position
complement(1134916..1136334)
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AA seq
472 aa
AA seq
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MSTDIEDSRSARFALRCSNWAERWFPDSWVFAALAVIIVALATMAMGAKPTDTAMAFGDG
FWSLIPFTMQMAFVVIGGYVVASSPPAVKLIDKLARIPKNGRSAVAWVALISMVASLLNW
GLSLVFGGLLVRALARRTELRMDYRAAGAAAYLGLGAVWALGLSSSAAQLQANPGSLPPS
ILSITGVIPFTQTIFLWQSGVLLLALIVVSLVIAYATAPGPNSARDAKACGIDPSFSMPK
PQPRTRPGEWLEYSPLLTILLALLAAGWLYHEFATKPAITAISGLNTYNFLFLMLGALLH
WRPRSFLEAVARAVPTTTGVLIQFPLYGSIAALLTVVKGVDGQTLAHHISTFFVQIASHD
TYALLMGIYSAVLGFFIPSGGGKWIIEAPYVMQVANDLQYHLGWAVQIYNAAEALPNLIN
PFYMLPLLGVLGLKARDLIGFSFVQLLVHAPLVLVLLWALGTTLSYMPPVAP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacagacattgaagacagccgttccgcccgttttgccctgcgctgctcgaactgg
gccgagcgctggttccccgactcctgggtgttcgccgcgctggcggtcatcatcgtcgcc
ctggccaccatggccatgggcgccaagcccaccgacaccgccatggccttcggcgacggc
ttctggagcctgatccccttcaccatgcagatggccttcgtggtcatcggcggttatgta
gtcgccagctcgccaccggcggtgaagctgatcgacaagctggcgcgcatcccgaagaac
ggccgttccgccgtggcctgggtggcgctgatctccatggtcgcctccttgctcaactgg
ggcctgtccctggtgttcggcggcttgctggtgcgcgccctggcccgtcgtaccgagctg
cgcatggactaccgcgccgccggcgccgcggcctacctgggcctgggcgcggtctgggcc
ctgggcctgtcgtcgtctgccgcgcaactgcaggccaaccctggcagcctgccaccgtcg
atcctgtcgatcaccggggtgattccattcacccagaccatctttctctggcagtccggc
gtattgctgctggccttgattgtggtctcgctggtcatcgcctacgccaccgcgcccggc
ccgaactcggcgcgcgacgccaaggcctgcggcatcgacccgagcttcagcatgcccaag
ccacaaccgcgcacccgccccggcgagtggctggaatacagccctctgctgaccatcctg
ctggccttgctggcggccggttggctctaccacgagttcgccaccaagccggcgatcacc
gcgatttccgggctcaacacctataacttcctgttcctgatgctcggcgcgctgctgcac
tggcgcccgcgcagcttcctcgaagccgtggcccgggccgtgccgaccaccaccggggtg
ttgatccagttcccgctgtacggctccatcgcggccttgctgacggtggtcaagggtgtc
gacggccagaccctggcccaccacatctcgaccttcttcgtgcagatcgcctctcacgac
acctacgcactgctgatgggcatctactcggcggtgctgggtttcttcattccctcgggc
ggcggcaaatggatcatcgaggcgccctacgtgatgcaggtggccaatgacctgcaatac
cacctgggctgggcggtgcagatctacaacgccgccgaggcgctgccgaacctgatcaac
cccttctacatgctgccgctgctgggggtgctggggctcaaggcgcgggacctgatcggt
ttctccttcgtccagctgctggtgcacgcgccgctggtgctggtgctgctgtgggcattg
ggcaccacgctgagctatatgccacccgtggcgccctga
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