Pseudomonas chlororaphis subsp. aurantiaca: JM49_06125
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Entry
JM49_06125 CDS
T03338
Name
(GenBank) transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_06125
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
Other families
JM49_06125
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
HTH_8
AAA
AAA_2
GAF_3
HTH_50
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIS11271
LinkDB
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Position
complement(1308994..1310544)
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AA seq
516 aa
AA seq
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MTAKSLLTALLPLVSDLSRELPEGERYRRLLEAMRALLPCDAAALLRLDGEWLVPLAVDG
LSTDTLGRRFKVSEHPRFAALLSHPGPTRFASDSDLPDPYDGLVDGLHEHLEVHDCMGCP
LFIDERPWGLLTLDALDPQRFEPIELDALQAFASLAAATVNAAERIERLALRAEDEHQRA
EVYRQASGQNREMIGQSKAHKRLLEEIGLVGGSDLTVLITGETGVGKELVAQAIHAASPR
ADKPLISLNCAALPDTLVESELFGHVRGAFTGATNDRRGKFELANGGTLFLDEVGELSLT
VQAKLLRVLQSGQLQRLGSDQEHQVDVRLIAATNRDLAEEVRSGRYRADFYHRLSVYPLL
VPALRDRGRDVLLLSGYFLEQNRSRMGLSSLRLTSDAQAALLAYAWPGNVRELEHLIGRS
ALKALGNCRERPKILSLSAADLDLPDASAPVAPQPAPAAMAEIPGGGDLRQATENYQRQL
ISACLERHQHNWASAARELGLDRANLGRMAKRLGLK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaaatccctgctcaccgccttgttgcccctggtctccgacctgtcccgcgaa
ctgcctgaaggcgagcgctaccgccgcctgctggaagccatgcgcgccctgctgccctgc
gacgccgccgcgctgctgcgcctggatggcgaatggctggtgccgctggcggtggatggc
ctgagcaccgacaccctgggccggcgtttcaaggtcagcgaacacccgcgtttcgccgcc
ctgctcagtcaccccggccctacccgcttcgccagcgacagcgacttgccggacccttac
gacggcctggtggatggcctgcacgaacacctggaagtccacgactgcatgggctgcccg
ctgtttatcgacgaacgcccctggggcctgctgaccctggatgccctcgacccacagcgc
ttcgagccgatcgaactggatgccctgcaggccttcgccagcctggcggcggccaccgtc
aacgccgccgagcgcatcgagcgcctggccctgcgcgccgaagacgaacaccagcgcgcc
gaggtctatcgccaggccagcggccagaaccgcgaaatgatcggccagagcaaggcgcac
aaacgcctgctggaggaaatcggcctggtcggcggcagcgacctgacggtgctgatcacc
ggcgaaaccggggtcggcaaggaactggtggcccaggccatccacgccgcctcgccccgg
gccgacaagccgctgatcagcctcaactgcgccgccctgcccgacaccctggtggaaagc
gaactgttcggccatgtacgcggcgcctttaccggcgccaccaacgaccgccgcggcaaa
ttcgaactggccaatggcggcacgctgtttctcgacgaagtgggcgagttgtcgctgacc
gtgcaggccaagctgctgcgcgtgctgcaaagcggccagctgcaacgcctggggtcggac
caggagcatcaggtcgacgtgcggctgatcgccgccaccaaccgcgacctcgccgaagaa
gtgcgcagcggccgctatcgcgcggacttctatcaccgcctcagcgtctatccgctgctg
gtgccggccctgcgcgaccgcggccgcgatgtgttgctgctcagcggctacttcctcgag
cagaatcgctcgcgcatgggcctgagcagcctgcgcctgaccagcgatgcccaggcggcg
ctgttggcctacgcctggccgggcaatgtccgtgaactggaacacctgatcggccgcagc
gccctcaaggccctgggcaattgccgtgaacggccgaagatcctcagcctgagcgccgcc
gacctggacctgccggacgcctcggcaccggtcgcgccccagcccgccccggcagccatg
gccgagattcccggcggcggcgatctgcgccaggccaccgaaaactaccagcgccaactg
atcagcgcctgccttgaacgtcaccagcacaactgggccagcgccgcccgcgagctgggc
ctggaccgcgccaacctgggacgcatggcaaagaggctaggcttgaagtga
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