Pseudomonas chlororaphis subsp. aurantiaca: JM49_07325
Help
Entry
JM49_07325 CDS
T03338
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_07325
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
JM49_07325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_16
ResIII
TrwB_AAD_bind
T2SSE
AAA_10
AAA_30
AAA_7
AAA_19
CbiA
AAA_6
SRP54
P-loop_TraG
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIS11504
LinkDB
All DBs
Position
1566022..1567509
Genome browser
AA seq
495 aa
AA seq
DB search
MPDSSQLVIGADLAGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAETFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERIAGMPWLNHKPQAYPVTLWDIHGQSGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPASDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDAEKPLLALFFDEAHLLFAGTPKALQERLEQVVRLIRSKGVG
VYFVTQSPGDLPDDVLAQLGLRVQHGLRAFTAKEQKSLRAVADGFRPNPAFDALSVLTEL
GIGEALVGTLQEKGTPEMVQRVLVAPPQSRIGPLTEAERAALISSSPLVGRYDKPVDRES
AYEVLMGRKGLAPEAEVAPGKPAAEEPSFTDRAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccggattcatcgcaactcgttatcggtgccgatctcgcggggcaaccgattgcccag
gccatgcgcctggcaaatcgtcacgggctggtggcaggcgctaccgggacagggaaaacc
gtcaccttgcaacggctggcagaaaccttcagcgatgccggtgtcgcggtgttcgccgcg
gacatcaagggtgacctgtgtggcctgggcgccgcgggcaatccccagggcaaggttgcc
gaacgtattgccgggatgccgtggctgaaccacaagccccaggcttatccggtcacgttg
tgggacattcacgggcagtccggccatccgctgcggaccaccctgagcgaaatgggcccg
ctgctgctgggcagcctgctggaactgaccgacagccagcaatcggcgttgtacgcggca
ttcaaggtggctgaccgcgaaggcctgttgctgctcgacctgaaagacctcaaggcgttg
ctcaaccacctaaaggacaacccgcagctgctgggggatgacgcggcactgatgaccacc
ggctccagccaggccttgttgcggcgcctggccaccctggaacagcagggcgccgaagcc
ctgttcggcgagccggccctgcaactggaagacatcctgcagccggccagtgacgggcgc
gggcggattcacctgctcgacgccagccgcctggtgcacgaggcgcccaaggtctatgcg
accttcctgttgtggctgctggccgaactgttcgagcaactgccggagcgcggcgatgcg
gaaaagccgctgctggcgctgtttttcgacgaagctcacctgttgttcgccggcacgccc
aaggcgttgcaggagcggctggagcaggtggtgcggctgattcgctccaaaggcgtgggc
gtgtacttcgtcacccagtcgccaggcgacttgccggacgacgtgctggcgcaactgggg
ctgcgcgtccagcacggcttgcgggcattcaccgccaaggaacagaagtccttgcgcgcc
gtggcggacggtttccggccgaacccggcgttcgacgcgctgtcggtgctcaccgagctg
gggattggcgaggcgctggtcggtaccctgcaggaaaaaggtacgccggagatggtccag
cgagtgctggtggcaccgccgcagtcgcgcatcgggccgttgaccgaggccgagcgagcg
gcgctgatcagcagttcgccgttggtcggccgttatgacaagccggtcgaccgcgagtcg
gcctatgaagtgttgatggggcgcaagggcctggcacctgaggccgaggttgcgccaggc
aaaccggccgccgaggagccgagctttaccgatcgggctggcgagttcctcggtaccgcc
gccggtcaggccctgaagtcggccatgcgccaggccgccaatcagttggggcggcagctg
gtgcgtgggctgatggggtctctgctggggggcagcaagcgccgctga
DBGET
integrated database retrieval system
