Pseudomonas chlororaphis subsp. aurantiaca: JM49_07925
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Entry
JM49_07925 CDS
T03338
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00061
Fatty acid biosynthesis
pcp00071
Fatty acid degradation
pcp01100
Metabolic pathways
pcp01212
Fatty acid metabolism
pcp02024
Quorum sensing
pcp04146
Peroxisome
Module
pcp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JM49_07925
00071 Fatty acid degradation
JM49_07925
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JM49_07925
09145 Cellular community - prokaryotes
02024 Quorum sensing
JM49_07925
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcp01004
]
JM49_07925
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcp04147
]
JM49_07925
Enzymes [BR:
pcp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JM49_07925
Lipid biosynthesis proteins [BR:
pcp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JM49_07925
Exosome [BR:
pcp04147
]
Exosomal proteins
Exosomal proteins of breast milk
JM49_07925
Exosomal proteins of breast cancer cells
JM49_07925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AIS11614
UniProt:
A0AAJ0ZJR1
LinkDB
All DBs
Position
1702533..1704221
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AA seq
562 aa
AA seq
DB search
MIQDFWKDKYPAGIAADINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEAVVPKTSVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLSQGHGQPVKDANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMASNLNEGCEILITPLPLYHIYAFTFHCMAMMLSGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKDVTGCPICEGYGM
TETSPVATVNPGQNIQMGTIGIPVPSTLCRIVDDAGNELPLGEVGELCVKGPQVMKGYWQ
RQDATDEVMSDGWLKTGDIALIQPDGYIRIVDRKKDMILVSGFNVYPNELEDVLATLPGV
LQCAAIGVPDEKSGESIKIFIVAKPGVTLTKEQVMEHMRANVTGYKVPKAVEFRDALPTT
NVGKILRRELRDEELKKLGVKK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagacttttggaaggataagtacccagctgggattgctgccgatatcaatcca
gacgagtatccgaatattcaggcggtgttgaagcagtcctgccaacgttttgccgacaaa
ccggcctttagcaacctcggcaagacactcacctacggtgagctgtacgaactgtccggt
gcttttgccgcgtacctgcaacagcataccgatttgcaacccggcgatcgaatcgccgtg
caactgcccaacgtcctgcagtacccggtcgcagtattcggcgccatccgcgccggcctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggcgccaaggccctggtatgcctggccaacatggcgcacctggccgaagccgtggtg
cccaagaccagcgtcaagcatgtgatcgtcaccgaagtggcggacctgctgccaccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaagatggtgccggcctatcac
ctgcccaaggccgtcaagttcaacgacgtgctgagccagggccatggccagccggtcaag
gacgccaacccggccagcagcgatgtcgccgtgctgcaatacaccggtggcaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctggtggcgaacatgctgcagtgccgg
gcgctgatggcctccaacctcaatgagggttgcgagatcctgattaccccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgagcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggcttcgtcggcctcaacactctgtttgtcgccctgtgcaacaacgaagccttc
cgcaagctggacttctcggcgctgaaagtcaccctgtccggcggcatggcgctgcaactg
gcggcggccgaacggtggaaggacgtgaccggttgcccgatctgcgaaggttacggcatg
accgaaaccagcccggtggccaccgtcaacccgggccagaatatccagatgggcaccatc
ggcatcccggtgccgtcgaccctgtgccggatcgtcgacgatgccggcaacgagctgccc
ctgggcgaagtcggcgagctgtgcgtcaagggcccgcaggtgatgaagggctactggcag
cgccaggacgccaccgatgaagtgatgagcgacggctggctgaagactggcgatatcgcg
ctgatccagccggatggctatatccgcattgtcgatcgcaagaaagacatgatcctggtc
tccggcttcaacgtgtatccgaacgagctggaagatgtgctggcgacgttgccgggcgtg
ttgcagtgcgcggccatcggcgtgccggacgagaagtcgggcgagtcgatcaagatcttc
atcgtcgccaagccgggcgtgaccctgaccaaggaacaggtgatggagcacatgcgcgcc
aacgtcaccggctacaaggtgcccaaggccgtcgagttccgcgatgcgctgccgaccacc
aacgtcggcaagatcctgcgtcgcgaactgcgcgacgaagagctgaagaagctgggcgtg
aagaagtaa
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