Pseudomonas chlororaphis subsp. aurantiaca: JM49_08000
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Entry
JM49_08000 CDS
T03338
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_08000
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JM49_08000
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AIS11628
UniProt:
A0AAJ1E2D8
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Position
complement(1714907..1715938)
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AA seq
343 aa
AA seq
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MTSSKNDKNTRTTGRPTLNEVARLAGVSPITASRALRGIDTVATELVEKVRKAASELNYV
VNPAARALASAQSHSVVVLVPSLSNLLFIDTLEAIHQVLRPKGFEVLIGNFHYSPDEEEN
LLRNYMAYQPRGLLLTGFDRTESARRMVEASNVPCVYMMDLNPEAGLNCVGFSQHNAGET
AAEHLISRGRKRLAYIGAQLDQRTLMRGEGFRRGLEKAGLYDPQLEVLTPRPSSVGLGGE
LFLQLLHSHPDVDAIFFGNDDLAHGALLEAMRCGIRIPEQVAVMGFNDLPASAHMVPRLS
SISTPREAIGRRAAEQLLTLMAGNSVAKPVVDMGFELKVREST
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctccaagaacgataaaaatacccgcaccacggggcgccccaccctcaacgaa
gtcgcgcgcctggccggcgtcagcccgatcaccgcctcgcgagcgctgcgcggcatcgac
acggtggccaccgaactggtggaaaaggtgcgcaaggccgccagcgaactcaactacgtg
gtcaaccccgccgcgcgcgccctggcctcggcccagagccattcggtggtggtgctggtg
ccgtcgctgtccaacctgctgttcatcgacaccctggaagccattcatcaggtcctgcgg
cccaagggcttcgaagtgctgatcggcaacttccactattcccccgacgaagaagaaaac
ctgctgcgcaactacatggcctaccagccacgcggtttgctgctgaccggcttcgaccgg
accgaaagtgcccgacggatggtcgaagccagcaacgtcccctgcgtctacatgatggac
ctcaaccccgaggccggcctgaactgcgtgggcttctcccagcacaacgccggggaaacc
gccgccgagcacctgatctcccgcggccgcaagcgcctggcctacatcggcgcccagctc
gaccagcgcaccctgatgcgcggtgagggtttccgccgcggcctggaaaaagccggcctc
tacgacccgcaactggaagtcctcaccccgcgcccttcgtcggtgggcctgggcggtgaa
ctcttcctgcaactgctgcacagccacccggacgtcgacgcgatcttcttcggcaacgac
gacctggctcacggcgccctgctggaagccatgcgctgcggcatcaggatccccgagcaa
gtggcggtgatgggcttcaacgacctgcccgcctcggcgcacatggtgccgcgcctgagc
agcatcagcaccccgcgcgaagccatcggccgccgcgccgcggaacagctgctgaccctg
atggccggcaacagcgtggccaagccggtggtggacatgggcttcgagctgaaggtgcgc
gagagcacctga
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