Pseudomonas chlororaphis subsp. aurantiaca: JM49_08620
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Entry
JM49_08620 CDS
T03338
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcp03009
]
JM49_08620
Enzymes [BR:
pcp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JM49_08620
Ribosome biogenesis [BR:
pcp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JM49_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
MTS
Methyltransf_11
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_23
PCMT
Methyltransf_15
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_12
DREV
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AIS11745
LinkDB
All DBs
Position
1835803..1837155
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AA seq
450 aa
AA seq
DB search
MAKPVRGLRFQPSGGSRAAQIPVGKKQRLTIERLANDGRGIAFLEGRTWFVVGALAGEEV
EARVLGAHGKVVEARTERVFSASDLRRPAPCAHAGRCGGCSVQHLPHDEQLALKQRMLAE
QLSRVAGVEPEEWAAPLSGPEFGYRRRARVAVRWDAKAKKLEVGFRAAGSQDIVAIDECP
VLVQPLQPIMSRLPAMLQRLSKPQALGHVELFSGSAIAVLLRHMAPLSAADLEILQAFCA
FHEAQLWLHGEGEPQPVDPDQALGYRLEPWNLQLAYRPGDFVQVNAGVNEAMVAQALEWL
APQADERVLDLFCGLGNFALPLAQNVREVVAVEGVATMVARAAENAASKNLHNTRFFQAD
LSQPLSDAEWAREGFSAVLLDPPRDGAFEVVRKLASLGAKRLVYVSCNPATLARDTVELV
KQGYRLKRAGILDMFPQTAHVEAMALFEAS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctaagccagtcagaggcctgcgcttccagccttcgggcgggagccgggcggcgcag
atccccgttggaaaaaaacagcgcctgaccatcgagcgcctggccaacgacggccgtggc
atcgcctttctggaagggcgtacctggttcgtcgttggtgcactggcgggcgaagaggtc
gaggcgcgagtactgggcgcccacggcaaagtggtggaagcccgtaccgagcgggtattc
agcgccagcgatctgcgccggccagcgccttgcgcccatgccggccgttgtggcggttgc
agcgtgcagcatctgcctcatgacgaacagcttgccctgaaacagcgcatgctcgccgag
cagttgtcgcgggtcgccggtgtcgagccagaggagtgggcggcgcccttgagcggtccg
gagttcggctaccgacgccgggcgcgggtcgcggtgcgctgggacgccaaggcgaaaaaa
ctcgaagtgggttttcgcgccgccggcagccaggacatagtcgccatcgacgaatgcccg
gtactggtacagcccttgcaaccgatcatgagccgcttgccggccatgctgcagcgcctg
agcaaaccgcaggcactgggacatgtggagttgttcagcggttcggcgattgctgtgctg
ctgcgccatatggcgccgttatccgcggccgacctggagattctccaggcattctgcgcg
ttccatgaggcccagctgtggctgcatggcgaaggcgagccgcaaccggtggacccggac
caggccctgggctatcgcctggagccgtggaatctgcagctggcttatcggccgggggat
tttgtccaggtcaatgccggggtcaacgaggcgatggtggcccaggccctggagtggctg
gcgccacaggctgacgagcgcgtgctggacctgttttgcggcctgggcaactttgccttg
ccgctggcgcagaacgttcgggaagtggtggcggtcgaaggggtggcgaccatggtcgcg
cgtgccgcggagaacgccgctagcaaaaatttgcataacacccggttttttcaggccgat
ttatcgcagcccctgagcgacgccgagtgggcccgcgaaggcttttctgcggtactcttg
gacccacctcgggacggggctttcgaggtggtacgcaagctggcgagcctgggcgccaag
cgcctggtttatgtgtcatgcaaccctgccactttggcgcgtgacacagtcgaactggtc
aagcagggctaccggttaaaacgtgccgggatcctcgatatgtttcctcagacggcacat
gtcgaggccatggcgttatttgaagcgagctag
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