Pseudomonas chlororaphis subsp. aurantiaca: JM49_08860
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Entry
JM49_08860 CDS
T03338
Name
(GenBank) transposase
KO
K07485
transposase
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JM49_08860
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Motif
Pfam:
DDE_Tnp_ISL3
HTH_Tnp_ISL3
Zn_ribbon_ISL3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIS11787
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Position
complement(1881340..1882545)
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AA seq
401 aa
AA seq
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MRDINTFLPFWEGFSVVTLKPEGDALQIDLVPHATRFPSCSNCQKPCSTTHEYCERAVRD
LPILGRAVRLSVLLRRVGCRDCGKRMEAVSWLDRYARMTRRLAEAVTQACERLPTLHVAQ
LFGLHWDTVRLLERRALQASLSALPKAQPRRLLMDEFALFKGHRYASVVLDADTRRVLWI
GEGRSRAAVRPFFEELGPEGCARIEAVAMDMNTAFDLEVRQHCPNARVIYDLFHVVAKYG
REVIDRVRVDEANRLRHDKPARKVIKQARWLLLRNPQNLKTPEQQVHLQDLLAANQALMT
VYLMKAELKMLWTPSTAWGWRSAWKQWLKHAHESAIPALIQFAKRLKGYWRGIVSRVRWP
MHTGQLEGINNRIKVIKRMAYGYRDSEFFFMKIKSVFPGNP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgagatattaatacgttccttcctttttgggagggcttttctgtcgtcaccctcaag
cctgagggtgatgctctacagatcgatctggttccccacgcgacccgattcccttcatgc
agcaactgccaaaaaccctgttcaaccacccatgagtattgcgagcgagccgttcgtgat
ttacccatcctcggccgtgcagtgcgtctgagcgtattgctcaggcgtgtgggctgccgt
gattgcggcaaacgcatggaggccgtcagctggctggatcgctatgcccgcatgacgcgc
cgcctggctgaagccgtcactcaagcctgcgagcgccttcccacgctgcacgtggctcaa
ctgtttgggctgcattgggacaccgttcgcttgctggagcgtcgagccttgcaagcctcg
ttgagcgcgttacccaaagcgcagccgcggcgcttgctgatggacgagtttgcgctcttc
aaaggtcatcgttacgccagcgttgtcctggatgccgatacacgacgcgtgctgtggatc
ggtgaaggccgcagccgagcagcggtcagaccattcttcgaagagctggggccagagggt
tgcgctcgaatcgaagcggtagcgatggacatgaacactgcctttgacctggaggtgcgt
cagcactgcccaaatgcacgggtgatctacgacctcttccatgtggtggccaaatatggc
cgggaggtgattgatcgggtccgcgtcgacgaggccaatcggctacgccatgacaagccg
gctcgaaaggtcatcaagcaagcgcgatggctgttgctgcgcaatccgcagaacctgaaa
acgccggaacaacaggttcacttgcaagatttgctggcggccaaccaagcgttgatgacg
gtctacctgatgaaggccgaactcaaaatgctctggacgccgagtactgcctggggctgg
agatcggcctggaagcaatggctcaagcatgctcatgagagcgcaataccggctttgatc
cagtttgccaaacggctgaagggttactggcggggcatcgtaagccgggttcgctggccg
atgcacacgggccaactggaaggcatcaacaatcgaatcaaagtcatcaagcggatggcg
tacggttaccgggacagcgagttctttttcatgaagatcaagagcgtctttcccggtaat
ccgtga
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