Pseudomonas chlororaphis subsp. aurantiaca: JM49_11050
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Entry
JM49_11050 CDS
T03338
Name
(GenBank) DeoR faimly transcriptional regulator
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00300
Lysine biosynthesis
pcp00470
D-Amino acid metabolism
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
pcp01120
Microbial metabolism in diverse environments
pcp01230
Biosynthesis of amino acids
Module
pcp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JM49_11050
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JM49_11050
Enzymes [BR:
pcp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JM49_11050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AIS12201
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Position
2404954..2405949
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AA seq
331 aa
AA seq
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MTSFYDARGNLYGVVAPATVRELGIALPASAAEAALARARWSEQVIEALCGWAPGTRPAG
AKAHRSDGLLVGPFQDAPPFDLLIVNTDGTLAERSGNGLTIFSQALTEQGLLPAQGPTEL
RVHHDKPDGVSPVATVVEPAQVAGVSGFWLDLGQPAFGAQAVGAQHGVEHDGSSCVELSR
VRGLARLRPEWSRSQFVRIGNPHCVTLVGDASALPSNRQMNEAPLAEALTRIAYAMPTGS
GEPCPAGVNLQWAWLEGPQRIAARVFERGEGPTASSGTSASAVASAAWRVGWVKAGEVAV
LMPGGTAPLRLEERGGELVRVSLFGTARLIP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttctacgatgcccgcggcaatctttacggtgtggtggcacctgccacggta
cgtgagctggggattgccttgccggccagcgcggccgaggcggcgctggcccgggcccgc
tggagcgaacaggttatcgaggccctgtgcggctgggcgcccggcacccggccggcaggg
gccaaggcccatcgcagcgacggtttgctggtcgggccgttccaggacgcgccgccgttc
gacctgctgatcgtcaacaccgacggcaccctggccgagcgcagcggcaacggcctgacc
atcttttcccaggccttgaccgagcaagggctgctgccggcccaggggcctacggagttg
cgggtgcatcacgacaaaccggatggggtgtcgccggtggcgaccgtggtcgagccggca
caggtcgccggggtgtccggcttctggctggacctcgggcaaccggcgttcggcgcacaa
gcagtgggtgcgcagcacggggtcgagcatgacggttcgagctgcgtcgagctgagccgg
gtgcgcgggctggcgcggctgcgcccggaatggagccgcagccagttcgtgcgcatcggc
aacccgcattgcgtgaccctggtcggcgatgccagcgccttgccgagcaaccggcagatg
aatgaagcgcccctggccgaggcgctgacgcgcattgcctacgccatgcccaccggcagc
ggcgagccctgcccggcgggggtgaacctgcaatgggcgtggctggaagggccgcagcgc
atcgccgcccgggtgttcgaacgcggcgaaggccccacggcatcctccggcaccagtgcc
agtgcggtggccagcgcggcgtggcgggtcggctgggtcaaggccggcgaagtcgcggtg
ctgatgcctggcggcaccgcgccgttgcgcctggaggagcggggtggggagttggtgcgg
gtgagcctgttcggtacggcgcgcctgatcccgtag
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