Pseudomonas chlororaphis subsp. aurantiaca: JM49_11470
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Entry
JM49_11470 CDS
T03338
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00280
Valine, leucine and isoleucine degradation
pcp00650
Butanoate metabolism
pcp00907
Pinene, camphor and geraniol degradation
pcp01100
Metabolic pathways
pcp01120
Microbial metabolism in diverse environments
pcp04146
Peroxisome
Module
pcp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JM49_11470
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JM49_11470
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JM49_11470
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JM49_11470
Enzymes [BR:
pcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
JM49_11470
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AIS12278
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All DBs
Position
complement(2487689..2488588)
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AA seq
299 aa
AA seq
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MSLPTHVRLVEVGPRDGLQNEAQPISVADKVQLVDALSAAGLGYIEVGSFVSPKWVPQMA
GSAEVFAQIQRKPGVTYGALAPNLRGFEDALAAGVKEVAVFAAASEAFSQRNINCSISES
LERFVPIMEAAKQHGVTVRGYVSCVLGCPYEGEVAPEQVAVVARELYSMGCYEVSLGDTI
GTGTAGATRRMFEVVAAHVPRDKLAGHFHDTYGQALANIYASLLEGIAVFDSSIAGLGGC
PYAKGASGNVASEDVLYLLNGLGIETGIDMERLILAGQQICSVLGRPTGSRVAKARYPG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccccacccatgtgcgcctggtcgaagtcggtcctcgcgacggtttgcagaac
gaagcccagcccatcagcgtcgccgacaaggtgcaactggtggatgccctgagcgcggcc
gggctcggctatatagaagtcggcagtttcgtctcgcccaaatgggtgccgcagatggcc
ggctccgccgaggtgttcgcgcagatccagcgcaagccgggagtgacctacggcgccctc
gccccgaacctgcgcggtttcgaagacgccctggccgccggggtcaaggaagtcgcggtg
ttcgccgccgcctccgaggccttctcccagcgcaacatcaattgctccatcagcgaaagc
ctggagcgcttcgtgccgatcatggaggcggcgaagcagcatggcgttaccgtgcgcggt
tacgtctcctgcgtgctgggctgcccttacgaaggcgaggtggcaccggaacaggtcgcc
gtggtcgcccgcgagctgtacagcatgggctgttacgaagtgtccctgggcgacaccatc
ggcaccggcaccgccggcgctacccggcggatgttcgaggtggtggccgcccacgttccg
cgggacaagctcgccgggcacttccacgatacatacggccaggccctggccaatatctac
gccagcctgctggaaggcatcgcggtgttcgacagctccatcgccgggctcggcggctgc
ccttacgccaagggcgccagcggtaacgtcgccagcgaggacgtgctgtacctgctcaat
ggactgggcatcgaaaccggtatcgacatggagcgcctgatcctcgccggccaacagatc
tgctccgtgctggggcggcccaccggctcgcgcgtcgccaaggcccgttacccaggttga
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