Pseudomonas chlororaphis subsp. aurantiaca: JM49_11985
Help
Entry
JM49_11985 CDS
T03338
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_11985
03036 Chromosome and associated proteins [BR:
pcp03036
]
JM49_11985
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
JM49_11985
Chromosome and associated proteins [BR:
pcp03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
JM49_11985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
HTH_IclR
HxlR
MarR_2
TrmB
MarR
HTH_10
HTH_20
HTH_Crp_2
HTH_36
LexA_DNA_bind
HTH_63
BRICHOS
HTH_9
M11L
GntR
HTH_5
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AIS12378
UniProt:
A0A1E1G027
LinkDB
All DBs
Position
complement(2595858..2596295)
Genome browser
AA seq
145 aa
AA seq
DB search
MIDEIDQALISALMEDSRRSLKALAQISGLSSPSVAERLRRLEERGVLKAYTVEVDPRFF
GYQLQAIVRIRPLPGKLQEVERQILAIPEFTECDKVTGEDCFIARLHVRDMEQLDNLLDH
LNSCAETNTAIVKKSPVKRRLPPMA
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgagattgaccaggcgctgatcagcgccctgatggaagactcacgccgttcg
ctcaaggccctggcacagatcagcgggctgtcgtcacccagcgtcgccgaacgcctgcga
cgcctggaagagcgcggcgtgctcaaggcctataccgtcgaagtcgaccccaggttcttc
ggctatcagttgcaggccatcgtgcgcatccggccgctgccggggaaactgcaggaagtc
gaacggcagatcctggccatccccgagttcaccgaatgcgacaaggtcacaggcgaggac
tgctttatcgcccgcctgcatgtgcgcgacatggagcaactggacaacctgctcgaccac
ctcaacagctgcgcggaaaccaacaccgcgatcgtcaagaaaagcccggtgaaacggcga
ttgccgccgatggcgtaa
DBGET
integrated database retrieval system
