KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_12700
Entry
JM49_12700        CDS       T03338                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_12700
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_12700
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_12700
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: AIS12507
LinkDB
Position
2755858..2757933
AA seq 691 aa
MFAPANTAHFTLSIPSVRHDFRVLAFDGTEALSTLYGIRVELVSENPDFDLESLLNQPAF
LRFGLNGEGLHGQIEDLYVGETGKRLTRYHLTLVPALHYLQFSFNQRIFQHLTVPQIIAQ
VLGGHGIQPDAYTFNVSTSAEREYCTQYGESDFEFVQRLCAEDGIAWHHQHSAAGHRLVF
SDDQTFFPLLGDTPYQQDTGTVADHPVVNRFSQHFSTRTSTVTRRDYDPKRPSLLLESQF
TAEFTPQLEDYLYPVPITTLERGRVLARQALERHRVDYQLAEGQSDQPLLRSGHFFNLTG
HPRKRCNDLWLLLSVTHCGRQPQSLEESVTSDTQPEDGFTQGYRNSFTAIPWDVFFRPPR
PTRRPLLGCQTARVTGPAGEEIFCDEFGRVKVEMHWDRLELGSDKSSCWLRVSSSWAGEN
FGTVTIPRIGMEVVVSFLEGNPDSPLITGVVANKSTPVPYPLPANKSRTVLRSRSTPDSG
GYNELSIEDRAGQEKVYLRAQRDIEQLILNDSDTAIGNDRREQITRNSHSLIGNDRFAQV
DGNSASLVKGDELHTTQGVRNTQIGGNELLSITGNGSLTVGGTWVVQAGPQARVTATHVV
VDAGASLTLKAGGQHIVITPGGIFSSVPIVLGGAPVAGITPQQALQALAEEPQAIVANSL
ALVAAAKQRAADFCPLCEACRDGQCAIGEVA
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgtttgcgcccgccaacaccgcgcacttcacgctctcgatcccctcggttcgccatgac
ttcagggtgttggctttcgacggcaccgaagccctcagcaccctttatgggatccgcgtc
gaactggtcagcgagaaccctgacttcgacctggagagcctgctcaatcagccggccttt
ctccgcttcggcctcaatggcgaaggccttcatgggcagatcgaggacctgtacgtggga
gagacgggcaagcgcctgacgcgctatcacctgaccctggtgccggcgctgcactacctg
cagttcagcttcaaccagcggatcttccagcacctgacggtgccgcagatcatcgcccag
gtgcttggcggccatggcatccagcccgacgcctataccttcaatgtcagtaccagtgcg
gaacgcgaatactgcacccagtacggggaaagcgatttcgagttcgtccagcgcttgtgc
gccgaggacggcatcgcctggcaccaccagcactcggccgcgggccatcgactggtgttc
agcgatgaccagacttttttccccctgttgggggatacgccgtaccagcaggatacgggc
acagtcgccgatcatccggtggtcaatcgcttctcccagcacttcagtacccgtaccagc
accgtgacgcgtcgcgactacgacccgaaacgtcccagcctgctgctggaaagccagttc
accgcggagttcacgccgcaacttgaggactacctctaccccgtaccgatcaccaccttg
gagcgtggcagagtgttggccaggcaggccctggagcggcaccgcgtcgattaccaattg
gccgaaggccaaagcgatcaaccgctgctgcgcagcgggcacttcttcaacctgaccgga
cacccgcgcaagcgctgcaacgatttgtggctgctgttgagcgtcacgcattgcggccga
caacctcagtcactggaagagtccgtcaccagcgatactcagcccgaagacggtttcacc
cagggctaccgcaacagcttcaccgcgattccgtgggacgtgtttttccgtcctccgcgg
ccgacgcgcaggccactgctgggctgccagaccgcccgggtcactggccccgccggcgag
gaaatattctgcgatgagtttggacgggtgaaggtcgagatgcactgggaccgcctggag
ctgggcagcgacaagagcagttgctggctacgggtttcttcaagttgggcgggggagaac
tttggcacggtgaccattccgcgaatcggcatggaagtcgtggtgagcttcctggagggc
aaccctgacagcccgttgattaccggcgttgtagccaacaagagcacacccgtgccgtac
cctttgccggcgaacaaaagcaggactgtattgcgcagtcgcagcacgccagacagcggc
ggttacaacgaactgtcgatcgaggaccgtgccgggcaggaaaaagtctacctgcgtgcg
caacgcgacatcgagcaactgatcctcaacgacagcgacaccgcaatcggcaacgaccgg
cgcgaacagatcacccgcaacagccacagcctgatcggcaacgaccgctttgctcaggtg
gacggaaatagcgccagcctggtcaagggtgacgaactgcacacgacccaaggcgtacgg
aacacgcagatcggtggcaatgaactgctctcgatcacgggcaatggcagcctcaccgta
ggcggaacctgggtcgtgcaggccgggccacaggctcgcgtcactgccacccatgtagtg
gtcgatgcgggcgcaagcctgacgctcaaggcgggtggacagcacattgtcattacccct
ggggggatcttcagcagtgtgcccatcgtcctgggcggagcgcctgtggcaggcattacg
ccacagcaggccctacaggcactggccgaggaaccgcaggccatcgttgccaattcgttg
gcgctcgttgctgccgccaagcaacgcgcggcggacttctgcccactctgcgaagcctgt
cgcgacgggcagtgcgctattggagaagtggcatga

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