KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_12800
Entry
JM49_12800        CDS       T03338                                 
Name
(GenBank) ATPase AAA
  KO
K11907  type VI secretion system protein VasG
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025  Biofilm formation - Pseudomonas aeruginosa
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_12800
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    JM49_12800
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_12800
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_12800
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Clp_N NBD_SMAX1 AAA_25 nSTAND3 Sigma54_activat TniB Zeta_toxin AAA_7 ATPase_2 AAA_14 NACHT AAA_18 T2SSE CbiA Hpr_kinase_C
Other DBs
NCBI-ProteinID: AIS12527
LinkDB
Position
complement(2778861..2781569)
AA seq 902 aa
MSEISRVALFGKLNSPAYKAIEAATVFCKLRGNPYVELVHWLHQFLQLQDCDLHRLVRQF
NLDPARLSRDITDALDRLPRGSTSITDLSGQVEEAVERGWVYGSLLFGESQVRSAHLIVG
MLKTPSLRHALSALSREFDKIKVEHLIERFDEYLGDSPENGLAASDGFNAGATPGEASGA
MAPSALGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPSLKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVDEPSEAKAILMMRGVASTMEQHHKVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALSTEQAIIGREQAIGIAIGTRQQEVEAA
LGEERQRLATLESRWSEEKALVDELLATRATLRAAAEPLDDTSGEAGVPSPRLDEAERTA
LRNKLGELQSRLATLQGESPLILPTVDYQAVAAVVADWTGIPVGRMARNEIDTVLRLDEH
MKKRIIGQDHALAMIAKRIQTSRAGLDNPSKPIGVFLLAGTSGVGKTETALALAEALYGG
EQNIITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPD
VHEIFFQVFDKGVMEDGEGRLIDFKNCLILLTTNAGTEMIASLCRDPRRLPDPDAIAKAL
REPLLQVFPPALLGRLVTVPYYPLSDEMLKAITRLQLERIKQRVESGHKVPFAYDDSVVD
LIVSRCTEIESGGRMIDAILTNTLLPDMSREFLTRMLEGKPLAGVRISQRDNALHYAFDP
HD
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgagtgagatcagccgcgtcgcgctgttcggcaagttgaacagcccggcctacaaggcc
atcgaagccgccaccgtgttctgcaagctgcgcggcaacccctatgtggaactggtgcat
tggctgcatcagttcctgcaattgcaggactgcgatctgcaccgcctggtccgccagttc
aatctcgacccggcgcgcctgtccagggatatcaccgacgccctggaccgcctgccgcgc
ggctcgacctcgatcaccgacctgtccgggcaggtcgaggaagccgtggagcgcggctgg
gtctatggcagtttgctgttcggcgagagccaggtacgcagcgcccacctgatcgtcggc
atgctcaagacgccaagcctgcgccacgcactctcggccctctcccgcgagttcgacaag
atcaaggtcgagcacctgatcgagcgtttcgacgaatacctcggcgactcgccggaaaac
ggcctggccgccagcgacggtttcaacgctggcgccacgccgggcgaagcgagcggcgcc
atggcgcccagcgcgctgggcaagcaggaggcgctcaagcgctttactgtggacctcacc
gagcaggcccgcagcggcaagctcgaccccatagtcgggcgcgacgaggagattcgccaa
ctggtcgacatcctcatgcgccgccggcagaacaaccccatcctcaccggcgaggccggg
gtcggcaagaccgcggtggtcgagggcttcgccctgcgtattgtcgccggcgacgtgccg
ccgagcctcaaggatgtcgaactgcgcagcctggacgtcggcctgttgcaggccggcgcg
agcatgaagggcgagttcgagcaacgcctgcgccaggtcatcgaggatgtgcaggcctcg
cccaagccgatcatcctgtttatcgacgaggcccataccctggtcggcgccggcggcgcg
gccggtaccggcgatgccgccaacctgctcaagccggccttggcccgcggcaccctgcgc
accgtggcggcaaccacctgggccgaatacaaaaagcacatcgagaaggacccggccctg
acccggcgcttccaggtggtgcaggtcgacgagccgtccgaggccaaggcgatcctgatg
atgcgcggcgtcgcctcgaccatggagcagcaccacaaggtgcagatcctcgacgaggcg
ctggaggcctcggtcaagctgtcgcatcgctatattccggcccggcagttgccggacaag
tcggtgagcctgctcgataccgcctgcgcgcgggtcgccatcagcctgcatgcggtgccg
gccgaagtggacgacagccgccgccgcatcgaggcgctgagcaccgagcaggcgatcatc
ggtcgcgagcaggccattggcatcgccatcggtactcgccagcaggaggtcgaggcggcc
ctcggcgaggaacgccaacgcctggcgaccctggagagtcgctggagcgaagagaaagcc
ctggtcgatgaactgctggcgacccgcgccaccctgcgcgccgccgccgaaccgctggac
gacaccagcggcgaggccggtgtgccatcgccgcgcctggatgaagccgaacgcacggca
ttgcgcaacaagctcggcgagctgcagagccgcctcgccaccttgcagggcgaaagcccg
ttgattctgcccaccgtggattaccaggcggtcgccgcggtggtcgccgactggaccggc
atcccggtcgggcgcatggcgcgcaacgaaatcgacaccgtgctcaggctcgacgagcac
atgaaaaaacgcatcatcggccaggaccatgccctggcgatgatcgccaagcgcatccag
acctcgcgcgccgggctggacaaccccagcaaaccgattggcgtgttcctcctcgccggc
acctcgggcgtgggcaagaccgagaccgccctggccctggccgaggccctgtacggcggc
gagcagaacatcatcaccatcaacatgagcgagttccaggaggcgcacaccgtctccacc
ctcaagggcgccccgcccggctatgtcggttacggcgaaggcggcgtgctgaccgaggcg
gtgcggcgcaaaccctacagcgtggtgttgctggacgaggtggaaaaggcccacccggac
gtgcacgaaatcttcttccaggtgttcgacaagggggtgatggaggacggcgaaggccgc
ctgatcgatttcaagaactgcctgatcctgctcaccaccaatgccggcaccgagatgatc
gccagcctgtgccgcgacccgcgacggctgcccgatcccgatgccatcgccaaggcgctg
cgcgagccgttgctccaggtattcccgccggccctgctcgggcgcctggtgaccgtcccc
tactacccgctgagcgacgagatgctcaaggccatcacccgcctgcaactggagcggatc
aagcagcgcgtggaaagcggacacaaggtgcccttcgcctacgacgacagcgtggtcgac
ctgatcgtctcgcgctgcaccgagatcgagagcggcggacggatgatcgacgccatcctg
accaataccctgttgccggacatgagccgggaatttctcacccgcatgctcgagggcaag
ccgctggcgggcgtgcgcatcagccaacgggacaatgcgctgcattacgcattcgacccg
catgactga

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