Pseudomonas chlororaphis subsp. aurantiaca: JM49_12840
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Entry
JM49_12840 CDS
T03338
Name
(GenBank) EvpB family type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JM49_12840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcp02044
]
JM49_12840
Secretion system [BR:
pcp02044
]
Type VI secretion system
Imp/Vas secretion system core components
JM49_12840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
Motif
Other DBs
NCBI-ProteinID:
AIS12534
LinkDB
All DBs
Position
complement(2786631..2788127)
Genome browser
AA seq
498 aa
AA seq
DB search
MAELMKDPQAQADAAIEQPSDFAALLLQEFKPKTEHAREAVESAVRTLAEQALSKTELIS
NDAIKSIESIIAAIDAKLTAQVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVMS
IAKGDLHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPFGCLVGDYYFDQSSPDVELLG
ELAKVCAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAAWRSLRDSDDSRYI
GLTMPRFLARLPYGAKTDPVDAFAFEEETNGADSSKYTWANSAYAMAVNINRSFKLYGWC
SRIRGVESGGEVPNLPTHTFPTDDGGVDMKCPTEIAIADRREAELAKNGFMPLLHKKNTD
LAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDD
MQRWLQNWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEVEGNPGYYSSKFYLRPHYQLE
GLTVSLRLVSKLPSAKAV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccgaattgatgaaagacccgcaggcccaggcagacgccgcgatcgaacaaccgagc
gacttcgccgccctgctcctgcaagagttcaagcccaagaccgagcacgcccgcgaggcg
gtggaaagcgccgtgcgcaccctggccgaacaggccctgagcaagaccgagctgatctcc
aacgacgcgatcaaatccatcgaatcgatcatcgccgcgatcgatgccaagctcaccgcg
caggtcaacctgatcatgcatcacgccgacttccagcaactggaaagcgcctggcgcggc
ctgcactacctggtcaacaacacggaaaccgacgagcagctgaagatccgcgtgatgagc
atcgccaagggcgacctgcacaagaccctgaagaagttcaagggcaccgcctgggaccag
agcccgatcttcaagaaaatgtacgaagaggaatacggccagttcggcggcgagccgttc
ggctgcctggtgggcgattactacttcgaccagtcgtcgccggacgtcgagctgctcggc
gagctggccaaggtctgcgcggcgatgcatgcgcctttcatcagcgcggcctcgccgacg
gtgatgggcatgggctcctggcaggagctgtccaacccgcgcgacctgaccaagatcttc
accacaccggaatacgcggcctggcgttcgctgcgcgattccgatgattcgcgctacatc
ggcctgaccatgccgcgtttcctcgcccgcctgccctacggcgccaagaccgacccggtg
gatgccttcgccttcgaggaagaaaccaacggcgccgacagctccaagtacacctgggcc
aactcggcctatgccatggcggtgaacatcaatcgctcgttcaagctctatggctggtgc
tcgcggattcgcggcgtggagtccggcggcgaagtgccgaacctgccgacgcacaccttc
ccgaccgacgacggcggcgtggacatgaagtgcccgaccgaaatcgccatcgccgaccgg
cgcgaggcggagctggcgaagaacggcttcatgccgctgctgcacaagaagaacaccgac
ctcgccgccttcatcggcgcgcaatcgctgcagaagccggccgagtatgacgaccccgac
gccaccgccaacgccaacctggcggcacgcctgccctacctgttcgccacctgccgcttc
gcccattacctgaagtgcatcgttcgcgacaagatcggctcgttcaaggaaaaggacgac
atgcagcgctggctgcagaactggattctcaattacgtggacggcgacccggcccactcc
accgaaaccaccaaggcccagcaccccctggccgcggcggaggtggtggtcgaggaggtc
gagggcaatcccggttactacagctcgaagttctacctgcgcccgcactaccagctcgaa
gggctcacggtatcgctgcggctggtatccaagcttccatccgccaaggcggtttga
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