Pseudomonas chlororaphis subsp. aurantiaca: JM49_12845
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Entry
JM49_12845 CDS
T03338
Name
(GenBank) hypothetical protein
KO
K11901
type VI secretion system protein ImpB
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JM49_12845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcp02044
]
JM49_12845
Secretion system [BR:
pcp02044
]
Type VI secretion system
Imp/Vas secretion system core components
JM49_12845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
AIS12535
UniProt:
A0AAJ1E534
LinkDB
All DBs
Position
complement(2788143..2788658)
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AA seq
171 aa
AA seq
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MANTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLVGKPAEPLPAVADRK
FLEIDVDNFDSRLKAMKPRVAFNVPNALTGEGNLSLDITFESMDDFSPAAVARKVDALNQ
LLEARTQLANLLTYMDGKTGAEDMIMKAIKDPALLQALASAPKPTEPEPQA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaccagcagccagaaattcatcgcccgtaaccgtgctccccgggtgcagatc
gagtacgacgtagagctttacggtgcggagaagaaggtgcagttgcccttcgtcatgggg
gtgatggccgaccttgtcggcaagcccgccgaaccgctgccggcggtggccgaccgcaag
ttcctggagatcgacgtcgacaatttcgactcgcggctcaaggcgatgaaaccacgggtg
gcgttcaacgtgcccaatgccctgaccggcgaaggcaacctgagcctggacatcacgttc
gagagcatggacgacttcagccccgccgcggtggcgcgcaaggtcgatgccctcaaccaa
ctgctcgaagcccgcacccagctggccaatctgctgacctacatggacggcaagaccggc
gccgaggacatgatcatgaaggcgatcaaggacccggcgctgttgcaggcattggccagt
gcgccgaaaccgaccgaacccgagccgcaagcctga
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integrated database retrieval system
