KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_12855
Entry
JM49_12855        CDS       T03338                                 
Name
(GenBank) signal peptide protein
  KO
K11913  type VI secretion system protein
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025  Biofilm formation - Pseudomonas aeruginosa
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_12855
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    JM49_12855
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_12855
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   JM49_12855
SSDB
Motif
Pfam: T6SS_FHA_C FHA Yop-YscD_cpl
Other DBs
NCBI-ProteinID: AIS12537
LinkDB
Position
2790123..2791523
AA seq 466 aa
MPLRLTITSYHKLTPGQRAEFELDRGELKIGRNPENDWVLPDPERLVSGQHCVIQLRDGT
YYLTDTSTNGVQLMNAGVRMHRGNSEPLRDGELLRVGEYDILVQVNGAPQIVSGAPGMSD
PFTGFDALIKRQAPGEMPGAAAAPPSRVQIHAGGSPLDTKPDLFDFLASPAVPPPALADH
VPPERHDFRPPEPQRASASPASETGAAPAIPADWDPFTELGAGPAPVAPPPVQAQPQPLP
AASENIASSAPEPVVQRAAVAPAAPATGGDNEQALEAFLRGAGLEHLRIDRGETRAQMEA
IGRSYRHMVEGLIEVLRARASLKGEFRMAQTMIRPVENNPLKFAPNVDEALLLLLRSGNQ
AFMPADQAIKESFDDLKAHQLAVMAGVQASIKHLLERFQPAVLEARLSQPSAIGALLPGR
RQAQYWELFTELYASISREAEDDFEDLFGREFSRAYEEQNAKLRKA
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgccgctgcgtttgacaatcaccagttatcacaagctgactcccggccaacgcgcggag
ttcgagcttgatcgcggtgagctgaaaatcggtcgcaaccccgagaacgactgggtactt
ccagacccggagcgcctggtgtccggccagcattgcgtcattcaactgcgtgacggcacc
tactacctgaccgacaccagcactaatggcgtacagttgatgaatgccggcgtgcgcatg
caccgcggcaacagcgaacccttgcgcgacggcgaactgctgcgcgtcggcgagtacgac
atcctggtgcaggtcaacggcgcgccacagatcgtcagcggcgcacccgggatgagcgat
ccctttaccggcttcgatgcgctgatcaagcgccaggcgccgggcgagatgcccggcgca
gcggcggcgccccccagcagggtacagatccacgcgggcggttcgcccctggacaccaag
cccgacctgttcgattttctcgcgtccccggccgtcccccctccggccctggccgaccac
gtgccgcccgaacgccatgatttccgtccgcccgagccacaacgcgccagcgcctccccg
gccagcgaaaccggcgcggcaccggcgattccggcggattgggaccccttcaccgagctg
ggtgcgggcccggcgccggtggcgccgccccctgtgcaagcccagccgcaaccattgcca
gcggcatcggagaatattgccagcagcgcacccgaaccggtcgtgcaacgggccgcggtt
gcgcctgcggcgccggcaaccgggggcgacaatgaacaggcgctggaagcctttctcagg
ggcgcggggctcgagcacttgcgtatcgacagaggcgaaacccgcgcgcaaatggaggcc
atcggccgcagctaccggcatatggtcgaggggttgatcgaggtgctgcgcgcccgtgcc
agcctcaagggtgagttccgcatggcccagaccatgatccgcccggtggagaacaacccc
ctcaaattcgcccccaatgtcgatgaggcgctgctgttattgctgcgttccggcaaccag
gccttcatgccggccgaccaggcgatcaaggaaagtttcgacgacctgaaagcgcatcaa
ctggccgtcatggcgggcgtacaagcctcgatcaaacacctgctcgagcgttttcagcca
gcggtactggaagcgcgtttaagtcaaccttcggctattggcgctttgctgcccggtaga
cgtcaagcgcaatactgggagttgttcacggaactctatgcgagcatttccagggaggcc
gaagatgatttcgaggatttgttcgggcgcgaattcagtcgagcctatgaagaacaaaat
gccaagttgcgaaaagcctga

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