KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_12860
Entry
JM49_12860        CDS       T03338                                 
Name
(GenBank) type VI secretion protein
  KO
K11906  type VI secretion system protein VasD
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_12860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_12860
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_12860
SSDB
Motif
Pfam: T6SS-SciN
Other DBs
NCBI-ProteinID: AIS12538
LinkDB
Position
2791631..2792101
AA seq 156 aa
MPKFLLFATVLLLTACTSSPPPPPTPTVVVMHIQAAADLNLSAGGQATPVRVRLYELKNG
GAFSRADYFSLVNATGATLSADLVAQDELLIQPGQRLTLERTLDEQSRLLGLVVSYRELD
SAVWRQVVSIPSNETTPLTVSLTARAISAAATKPAN
NT seq 471 nt   +upstreamnt  +downstreamnt
atgccaaagttcttgttgttcgcaacagtactgctgctgactgcctgtacttcgagtccg
ccgccgccccctacgcctactgtcgttgtcatgcatatccaggccgctgccgatctgaat
ctttcggcgggcggccaggcgacgccggtgcgggtgcgcttgtatgagttgaaaaacggc
ggagccttcagtcgcgccgactatttctccctggtgaatgccaccggcgcgaccttgtcc
gcggacctggtggcgcaggacgaattgctcatccagccgggtcaacggctgaccctggag
cgcacgctcgacgagcagagccgtttgctcggcctggtggtgtcctaccgtgaactggac
agcgccgtgtggcgtcaggtggtcagtatcccgagcaatgaaaccacgccattgacggtt
tccctgacagccagggcgatcagcgcggcagccacgaaacctgcgaattag

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