Pseudomonas chlororaphis subsp. aurantiaca: JM49_12930
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Entry
JM49_12930 CDS
T03338
Name
(GenBank) LuxR family transcriptional regulator
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JM49_12930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcp02022
]
JM49_12930
Two-component system [BR:
pcp02022
]
NarL family
LiaS-LiaR (cell wall stress response)
JM49_12930
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
HTH_10
Sigma70_r4_2
Sigma70_r4
HTH_AsnC-type
HTH_24
HTH_23
HTH_11
HTH_22
HTH_40
NirdL-like_HTH
HTH_20
DUF2089
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AIS12552
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Position
2813440..2814156
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AA seq
238 aa
AA seq
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MPDQKKTIRVMLIDCRPLVLMGLHDLINARKPRMEVSGQATTYTTALDLADQLRPNVIFF
SFFPDALNPLEVVAGLTRRPDIKLLVLKGLYESVPVAQVIEAGARGIVLAEDPTESIVRA
IIKVHDYDVGLDRAWSGGLSGYAASRHVPLRCNLEQAKQARLTLRERELIRAIVGDPSAK
YMSIAERLGISEHTVHNHLSNIYQKLNLINRIDLLMYALKHGLTDNEEPPDSTWVELE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgccagaccagaaaaaaacgatacgcgtgatgctgatcgattgccgtcccctcgtgctt
atggggcttcatgatttgatcaatgcgaggaagccgcggatggaggtgagtggccaggcc
actacctacaccactgcgctggaccttgccgatcagctgcgtcccaacgtgatttttttc
agtttctttccggatgcgttgaaccccctggaggtggtcgcagggctgacccgccgcccg
gatatcaaactgctggtgctcaagggcctgtacgaatccgttccggttgcccaggtgatc
gaggcgggcgcgcgcggcatcgtgctggcggaagacccgacggaatcgatcgtccgggcc
attatcaaggtccacgattacgacgtcgggctggaccgagcctggtccggtgggctttcc
ggctatgccgcgagcaggcatgtacccctgcgatgcaacctggagcaggcgaaacaggca
cggctgacgctgcgcgagcgggaactgattcgcgccatcgtcggcgacccgtccgccaag
tacatgagcatcgccgagcgcctgggcatcagtgagcacaccgtgcacaaccacctcagc
aacatctatcagaagctcaacctgatcaaccgcatcgacttgctgatgtatgcgctcaag
cacgggctcaccgacaacgaagagccgcccgactccacgtgggtggaactggaatga
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