KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_13065
Entry
JM49_13065        CDS       T03338                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_13065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_13065
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_13065
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: AIS12575
LinkDB
Position
complement(2859585..2862494)
AA seq 969 aa
MLDANAAHISLVIEGASTDLQVLSFTGREALNEPFCFELELVSTNPGLALEELLHKPALL
IFGSSNQGKIHGQVYSIGQGETGRRLTRYHISLRPQLAYLAHRVNQRIFQQMTVPQIIAQ
VLEEHGIQSDAYRFHLGTTYPERDYCTQYDETDLHFIQRLAEEEGLSYHFQHSDQRHLLV
FGDDQTVFPKLAPVAYQQDTGLVADTPVIKRFGLRLATRTSRVTRRDYDYTKPLFQLESD
AKSSAQPDLEDYDYPGRFTDRVRGKQLATRALERHRSDFRLAEGKSDQSLLVSGHFLPLT
EHGNTSWNDLWLLTEITHEAKQPQVLEESVTSDTTDNKDDFHQGYRNSFSAIPWDAPYRP
ALEHPKPRILGSQSAVVTGPEGEEIYVDALGRVKTQFFWDREGQHDDKTTCWMRVASNWA
GQNIGAISIPRVGMEVLVTFLEGDPDQPLITSCLYHSVHLPPYKLPDFKTLATVKSKEYK
GSRGNELRIDDTTSEISIALRSDHGASALNLGYLTHPRPSGGQPRGEGFELRTDRHGAVR
AAAGLLLTTEPRPNESKHHKDLPETAERLATAADQQDGFAIQAREVQAQESGDQDDVAKA
LKSQHQGILGSGPANMSANEFPEFTEPHLVLASPAGIALTTPRSSHIATGEHLALSSTGH
TSLSIGKRLLASASQGMRLFVQNLGWRLVAVTGDIDIKALKDSINLLAKLNITANADRIT
ITAKTELVIQGGGSATTYNAGGITHATSGPYTAHAANFAYTGAKSLAGTFPEPPKPGKGN
LELFNQYANLQGIKGGDFEVIDALGKSFKGTLDAKGFASVSGAAPGPARVMFGADPADTW
SDGSYIGKPEWPREPVTENSPGVQSLLDQVMAAAGNRDGGGLMEKGKGLAQAGMSALQTT
QQVKGALQAGAAGIPQLASAAMPKASAMLSAASKAGKLPSLPAVSLPKPSIQTPGLSPAS
NLLPSDFIS
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgctggatgcaaatgctgcgcatatttccttggtgatcgaaggtgcctccaccgacctc
caggtactcagcttcacaggccgcgaggccctgaacgagcctttctgttttgagcttgag
ctggtcagcaccaatccaggccttgccctcgaagagctgctgcacaaaccggcactcctg
atattcggctccagcaaccaaggcaagattcacggccaggtgtatagcattggccaaggc
gaaaccgggcgtcgactgacgcgttatcacatctccctgcgtccgcagttggcctacctg
gcccatcgggtcaaccagcgcatcttccagcagatgaccgtgccgcagatcattgcccag
gtcttggaagaacacggtatccagagcgatgcctatcggttccatctcggcacgacctat
cccgaacgcgactactgcacccagtacgatgaaacggatttgcatttcatccagcgcctg
gcggaagaagaaggcctgagttatcacttccagcacagtgatcagcgccacctgctggtg
ttcggtgatgaccagacagtgttccccaagcttgcccccgtggcttaccagcaagacacc
ggtttggtggccgacaccccggtgatcaagcgtttcggcctacgcctggcgacccgtacc
agccgggtgacgcggcgcgattacgactacaccaaacccttgttccagctggaaagcgac
gccaagagcagtgcccagccggatctggaagattacgattatcccgggcgcttcaccgac
cgtgtccggggcaagcagctcgccactcgggccctggagcgtcatcgcagtgacttccga
ttggccgaaggcaagagcgatcagtcgctgctggtcagcggtcacttcctgcccctgacc
gagcacggcaacaccagttggaacgacctctggttgctcaccgagatcactcacgaggcc
aagcagccacaggtgctggaagagtcggtgaccagcgacaccaccgacaacaaggatgac
tttcaccagggctatcgcaacagtttcagcgccattccctgggacgcaccctaccgtcct
gcgctggaacatcccaagccacgcatcctcggcagtcaaagcgcggtggttacgggccct
gagggtgaggaaatctacgtcgatgccctgggccgggtgaagacccaattcttctgggat
cgcgaaggccagcatgacgacaagaccacttgctggatgcgtgtggcctcgaattgggcc
gggcagaatattggtgccatctccataccgcgtgtcggcatggaagtgttggtgaccttc
ctcgaaggcgatcccgaccaacctctgattaccagttgcctctaccactcggtgcatctg
ccgccgtacaagctgcccgacttcaagaccctggccacggtcaagagcaaggaatacaaa
ggcagtcgcggcaacgaactgcggatcgacgacaccaccagcgagatcagcattgccctg
cgcagtgaccacggcgccagtgccctgaacctcggttacctgacccacccacggccatcc
ggcggccagccacgaggggaaggctttgaactgcgcaccgatcgccatggtgccgtgcgg
gcggcggccggtttgttgttgaccaccgaaccgcgccccaacgagtccaagcaccacaag
gatctgccggaaaccgccgagcgtctggccaccgccgccgaccagcaggacggtttcgcc
attcaggcgcgtgaagtacaggctcaagagtcaggcgaccaggacgatgtggccaaggcg
ctgaagagccagcaccagggcatccttggtagtggcccggcgaacatgagcgccaacgag
tttccggagttcaccgaaccccatctggtactcgccagcccggcgggcattgccctgacc
acgccacgttcgagccatatcgccaccggcgaacacctggccctgagcagcactggacac
accagtctgtcgatcggcaagcgcttgctggccagcgccagccagggcatgcgcctgttt
gtgcagaatctgggctggcgcctggtggccgtcaccggtgatatcgacatcaaggcgctc
aaggacagcatcaatctgctggccaagctcaatatcaccgccaacgccgaccgcatcacc
atcaccgccaagaccgagctggtgattcagggcggcggcagtgccaccacctacaacgcc
ggcggcatcactcatgctaccagcgggccttataccgcccatgcggcgaacttcgcctac
accggggcgaagagcctggcgggcaccttccccgagccaccgaaaccgggcaagggcaac
ctggagttgttcaaccagtacgccaatctgcaagggatcaaaggcggtgatttcgaagtg
atcgacgccctgggcaaaagcttcaaggggacgctggatgccaagggatttgccagcgtt
tccggtgcggctccgggcccggcgcgggtgatgttcggcgccgatccggcggacacctgg
agcgatggcagctatatcggcaagccggaatggccacgtgaaccggtgaccgaaaactct
ccaggcgtgcagagtctcctggatcaagtcatggcagcggccggtaaccgtgacggtgga
ggactcatggaaaaaggcaaaggcctggcacaggcgggtatgagtgcgctgcaaaccacc
cagcaggtcaagggtgcgctgcaggccggtgctgccggaataccacaactggccagtgcc
gccatgccgaaagcctcggcaatgctcagtgcggccagcaaggctggcaagttaccgagc
ctgcctgcggtctcgttgcccaaaccctcgattcagacaccgggcttgagccctgcctcg
aacctgctgccaagtgacttcatttcatga

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