Pseudomonas chlororaphis subsp. aurantiaca: JM49_13135
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Entry
JM49_13135 CDS
T03338
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_13135
Transporters [BR:
pcp02000
]
Other transporters
Pores ion channels [TC:
1
]
JM49_13135
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AIS12589
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Position
2875358..2877754
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AA seq
798 aa
AA seq
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MGSYTKHLLSTAIVSANVLGAVLWSGGAGAAQATEDSDTSARLDTVIVTGTRAQERTASA
SLSPIDVITGESLRSSGSSELATVLAKLIPSINFPRPSLVDGAELTRPAQLRGLSPDQVL
VLVNGKRRHTSAFVNLGGAVGRGSAPADLNAIPLSAIDHIEVLRDGASARYGSDAIAGVI
NIILKSADHGGSISTKYGQYKKGDGIQRQVAGNSGFALGDNGFVSLSGEGANNDYTDRAG
KDFRPASVGSTTYGQHVFRQGEPETEEGKFQFNSAYSFNDATELYGFGGYSKRRGETAAF
YRASNASNNNRVLHPNGYLPLINGTLQDTSLVLGLRGELLDNWHYDLSANYGKNTYELRT
KTINTSLGLDTPHAFDNGTLTNDQRQLSLDLSREFSLGWLPYPVSVAFGTEYLRQGYQIE
AGQPESYYQTGSSGLGGFRDSDAGSSSRHNFAQYLDLETHFTDKLAVSAAVRHEDYSDFG
SNVSGSLSARYDFTPRVALRGSVSTGFRAPSLAQQNFTFTSSQLIGNTIQESGTFAADSQ
VARLLGAEDLKAEKSRNYSLGLVLEPLDNLTVTADLYHIDIRDRVSLSSNLVLNNTAIDY
LKANGVGNINYTSARYFTNATDTSTDGVDLVANYRYQLDNGIRWNSTLGYNYNHTKVTDV
KANPAILDQLGVNLVRVDRRERIGLLGDTTPQHKLSLANDFNYGNWALHSNLVRYGEFTS
YQADKANDQTFSAAWLLDLAVDYKLQNWLFTLGGDNVTDKYPEKVNAYASSGGNLAYSTF
SPYGYSGAFYYAKVAYSW
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggggagctacacaaaacaccttctgtccacggcgatcgtctcggccaatgtgctgggc
gcggtgctctggagtggcggcgcaggggccgcgcaggccacggaagacagtgacacatcg
gcccggctggatacggtgatcgtcaccggcacccgggcccaggaacgcaccgccagcgct
tcgctgtcacccatcgatgtgattaccggcgagagcctgcgcagttccggttccagcgaa
ctggccacggtgctggccaagctgattccgtcgatcaatttcccgcgcccgagcctggtg
gacggcgccgagctgacccgcccggcgcagttgcgcgggttgtcgccggaccaggtgctg
gtgctggtgaacggcaagcgccgccacacctcagccttcgtcaacctcggcggcgcggtg
gggcgtggctcggcgccggcggacctgaatgcgatcccgctgtcggccatcgaccatatc
gaggtgctgcgcgatggcgcctcggctcgttatggctcggacgccattgccggggtgatc
aacatcatcctgaagagcgccgaccacggcggctcgatatccactaaatacgggcagtac
aagaagggcgacggcattcagcgccaggtcgccggcaacagcggttttgccctgggggac
aacggctttgtcagcctgtccggcgagggcgcgaacaacgactacaccgaccgcgccggc
aaagactttcggcccgccagtgtcggctccaccacctacggccagcatgtgttccgccag
ggcgagccggaaaccgaggagggcaagttccagttcaactccgcctacagcttcaacgat
gccaccgagttgtacggcttcggcggctacagcaagcgccggggcgaaaccgcggccttc
tatcgcgccagcaatgcctcgaacaacaaccgggtactgcaccccaacggttacctgccg
ctgatcaacggcaccctgcaagacaccagcctggtgctcggcctacggggcgagttgctg
gacaactggcactacgatctgtcggccaactacggcaagaacacctatgaactgcggacc
aagaccatcaacacctcgctgggcctggacaccccgcacgcgttcgacaacggcaccctg
accaacgaccagcggcaactgagcctggacctgtcccgggagttcagcctgggctggctg
ccttacccggtgtcggtggctttcggtaccgaatacctgcgccagggctatcagatcgaa
gccgggcaacccgagtcctactaccagaccggcagttccgggctgggcggtttccgcgat
tcggacgccggcagctcgtcgcgccacaacttcgcccagtacctggacctggagactcac
ttcaccgacaagctggcggtgtcggcggcggtgcggcatgaggactacagcgacttcggt
tccaacgtcagtggctcgctctcggcgcgctacgacttcaccccgcgggtggccttgcgc
ggcagtgtctccacgggctttcgcgcgccgtccctggcgcagcagaacttcaccttcacg
tcgtcgcagttgatcggcaacacgattcaggaatccggcaccttcgccgcggacagccaa
gtggccaggctgctgggggcggaagacctcaaggcggaaaaatcgcgcaactacagcctg
ggcctggtgctcgaaccgctggacaacctgacggtcaccgccgacctgtaccacatcgat
atccgcgaccgggtgtcgctgtcgtcgaacctggtgctcaataacaccgcgatcgattac
ctgaaagccaacggcgtcggcaacatcaactacaccagcgcgcgctacttcaccaacgcc
accgacaccagcaccgacggcgtggacctggtggccaactatcgctaccagctggacaac
ggcatccgctggaacagcacgctcggctacaactacaaccacaccaaggtcaccgatgtg
aaagccaacccggcgatcctcgatcaactgggggtcaacctggtacgggtcgaccggcgc
gagcgcatcggcctcttgggcgacaccacgccgcagcacaagctgagcctggccaacgac
ttcaactacggcaactgggcgctgcacagcaacctggtgcgttacggcgagttcaccagc
taccaggcggacaaggccaacgaccagaccttcagcgccgcctggctgctggacctggcg
gtcgactacaagctgcagaactggctgttcaccctgggcggcgacaacgtcaccgacaaa
tacccggagaaggtcaacgcctacgcctccagcggcggcaacctggcgtacagcaccttc
tcgccctacggctacagcggtgcgttctactacgccaaggtggcctatagctggtag
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