Pseudomonas chlororaphis subsp. aurantiaca: JM49_13190
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Entry
JM49_13190 CDS
T03338
Name
(GenBank) transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_13190
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
Other families
JM49_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
AAA
Mg_chelatase
HTH_8
AAA_2
AAA_16
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AIS12597
LinkDB
All DBs
Position
2886605..2888131
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AA seq
508 aa
AA seq
DB search
MLRESLAADLIVELPNAVRLQRLVQTLREYFKAGAVGLLRLDDDSLRPLATVGLVHEALG
RRFVIARHPRLAAIMASREPTWFEPDSRLPDPYDGLLDHPDNGPLAVHDCMGVSLYVEGR
VWGAITLDALRPGTFDRQARDELKRCSLQIEAALRVTRLEQENRSLRLSRSEPQDARGPV
EEGEILGQSEVLHQLLNELDVLADSELPVLLLGETGVGKELFARRLHRLSRRAHKPLVQV
NCAALPESLAESELFGHVKGAFSGATSDRAGRFDAANGGTLFLDEVGELPLSVQAKLLRT
LQNGEIQRLGADKPLHVDVRIIAATNRHLPDSIRDGLFRADLYHRLSVYPVPIPPLRERG
PDVLVLAGHFLELNRSRLGLRGLRLSSAAERALLAYPWPGNVRELEHVISRAALKQLSRG
GSRSQILTLEPDVLDLDSSVKGAELLEPSPLAADDGPFQPLSEAVDDYQRQKIHQALSRS
RNNWARAARLLEVDPSNLHKLARRLRLK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgaaagtctggcggccgacctgattgtcgagttgcccaatgccgtgcggttg
cagcgtctggtgcagaccctgcgggaatacttcaaggccggggccgtgggcctgctgcgc
ctggacgacgacagcctgcggccgctggccaccgtcggcctggtgcacgaagccctcggc
cggcgtttcgtgatcgcccggcacccgcgcctggcggcgatcatggcgtcccgcgagccc
acctggttcgagcccgacagccgcctgccggacccttatgacgggctgctcgaccacccg
gacaacgggccgctggcggtgcacgactgcatgggcgtgagcctgtatgtggaagggcgg
gtctggggcgccatcaccctcgacgcgctgcgccccggcaccttcgaccgccaggcccgc
gacgagctcaagcgctgcagcctgcagatcgaggccgcgttgcgggtcacccgcctggag
caggaaaaccgcagcctgcgcctgtcccgcagcgagccgcaggatgcgcgtgggccggtg
gaggagggcgagatcctcggccagagcgaagtcctgcaccagttgctcaacgaactggac
gtgctcgccgattccgagttgccggtgttgctgctgggcgagactggggtcggcaaggag
ctgttcgcccgtcgcctgcatcgcctgtcgcggcgcgcccacaagccgctggtgcaggtc
aactgcgcagcgctgccggagtccctggccgagagcgagctgttcggccacgtcaagggc
gccttctccggcgccaccagcgaccgcgccgggcgcttcgacgcggccaacggcggcacg
ctgtttctcgacgaggtcggcgagctgccgttgagcgtgcaggccaagttgctgcgcacc
ctgcagaacggcgagatccagcgcctgggcgcggacaagccgctgcatgtggatgtgcgc
atcatcgccgcaaccaaccgccacctgccggacagcatccgcgacgggctgtttcgcgcc
gacctgtaccaccggctttcggtgtacccggtgccgatcccgccgctgcgcgaacgcggc
ccggatgtgctggtgctggccgggcatttcctcgagctcaaccgcagccgcctcggcctg
cgtggcctgcgcctgtcgtcggcggccgaacgggcgctgctggcttacccctggccgggc
aatgtacgggagctggaacatgtgatcagccgcgccgcgctcaagcagctcagccgtggc
ggcagtcgcagccagatcctgaccctggagccggacgtgctcgatctcgacagctcggtg
aagggcgcggagctgctcgaaccgtcgccgctggcggccgacgacggacccttccagccc
ctgagcgaagccgtcgacgattaccagcggcagaagatccaccaggccctgagccgcagc
cgcaacaactgggcccgcgccgcccggctgctggaagtcgacccgagcaacctgcacaaa
ctggcccggcgcctgcgcctcaaatag
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