Pseudomonas chlororaphis subsp. aurantiaca: JM49_13960
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Entry
JM49_13960 CDS
T03338
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_13960
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
Other families
JM49_13960
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
Motif
Other DBs
NCBI-ProteinID:
AIS12727
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Position
3025360..3026490
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AA seq
376 aa
AA seq
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MFELDHDLAQDIVDRTMAILPYNVNVMDSQGLILGSGEPERINTRHEGAQLVLANGRVVE
IDAQTAKHLKGVQPGINLPLLHDQRLIGVLGITGEPERLRTYAELVRMTAEMLVGQRHQQ
AEQQWRRQRCDDLLALLLSDSGDSPRLVDEAQQMGLKPQLPRTPYLFELGPDQEGAAQGA
GQTVEALSAWLMSRYPDSWCVSSAKSSLLWCRPATLSVDNPRLLEKLDSLGWNILRIAVG
GQADGLAGLRRCYRRVGDLLAYGRDVLPQSRLLTLNRFRLPVMLWRHRNDDALDELLSPL
RKVIAKDSNGQLLATLRSWCDHDGQSQACADALGIHRNSLRYRMERIAELSGVDPLKLDG
MLALYLGVQLLPQSTE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaactggatcacgacctggcgcaggatatcgtcgaccggacgatggccatcctg
ccctacaacgtcaacgtcatggacagccagggcctgatcctgggtagcggcgagcccgag
cgcatcaacacccgccacgaaggcgcgcaactggtgctggccaacggccgggtggtagag
atcgacgcgcagaccgccaagcacctcaagggcgtgcagccggggatcaacctgccgctg
ctgcacgaccagcggctgatcggcgtgctgggcatcaccggcgagccggaacggctgcgc
acctatgccgagctggtgcgcatgaccgccgagatgctggtgggccagcgtcaccagcag
gccgaacagcaatggcgccgccagcgttgcgacgacttgctggcgctgctgctcagcgac
agcggggattcgccgcggctggtggacgaggcgcagcagatgggcctaaagccgcagctg
ccgcgcacgccttatctgttcgagctgggcccggaccaggaaggagcggcgcagggcgca
gggcagaccgtcgaagccctgagcgcctggttgatgtcgcgttacccggacagctggtgc
gtcagctcagccaagtcctcgttgctgtggtgccggccggcgaccctgagcgtcgacaac
ccgcggctgctggaaaagctcgacagcctgggctggaacatcctgcgcatcgccgtgggc
ggccaggccgacggactggcagggctgcgccgctgctaccggcgggtcggcgacttgctt
gcttatggccgcgatgtgctgccccagtcgcgcttgctgaccctcaatcgtttccgtctg
ccggtgatgctctggcgtcaccgcaatgacgatgccctggacgagttgctcagccccttg
cgcaaggtcatcgccaaggacagcaatggccagctgctggcgaccctgcgcagctggtgc
gaccacgacggccagagccaggcctgcgccgacgccctgggcatccaccgcaacagcctg
cgctaccgcatggagcgcatcgccgaactcagcggcgtcgacccgctcaagctcgacggc
atgctggcgctgtacctgggggtgcagctgttgccgcagagcaccgagtaa
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