Pseudomonas chlororaphis subsp. aurantiaca: JM49_14010
Help
Entry
JM49_14010 CDS
T03338
Name
(GenBank) AraC family transcriptional regulator
KO
K02508
AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_14010
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JM49_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
AraC_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIS12737
LinkDB
All DBs
Position
3035865..3036776
Genome browser
AA seq
303 aa
AA seq
DB search
MSDRQPIPNINIGQVYDQRYADSQVHYDKLSNLAGFFGRNMPVHRHDRFFQVHYVKSGAV
RVYLDDQQYLESGPMFFLTPPTIAHSFVTEADSEGHVLTVRQQLVWELIEADSRLASGPQ
VAPACVALARLDPGFAGEARRLELLFDELQEEVAGQGAGHAPALEALTRLILISLLRLSA
NSLKARPARHEDLQIFHRFNELIEAQYLEHWPLSRYAGQIGVTEARLNDVCRRIADLPSK
RLVYERLMQESKRLLLFTARSVNEICYQLGFKDPAYFSRFFQRYAKMTPGEYRARQGAAK
PWS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgccagccgatccccaacatcaacatcggccaggtctacgaccagcgttac
gccgattcgcaggtgcattacgacaagctgagcaacctggccgggttcttcggccgcaac
atgccggtgcaccgccacgaccggtttttccaggtgcactatgtgaaaagcggcgcggtg
cgggtctacctcgacgatcagcaatacctggaatcggggccgatgtttttcctcacgccg
ccgaccattgcccattccttcgtcaccgaggccgacagcgaaggccacgtgctgaccgtg
cgccagcagctggtgtgggagctgatcgaggccgacagccgcctcgccagcggtccccag
gtggcgccggcctgcgtggccctggcgcgcctggacccggggttcgccggcgaggcccgg
cgcctggagttactgttcgatgagttgcaggaggaagtcgccgggcagggcgccgggcac
gcgccggcgctcgaggccctgacccgcttgatcctgatcagcctgctcaggctttcggcc
aattccctcaaggcgcgcccggcccggcacgaagacctgcagatcttccatcgtttcaac
gaactgatcgaagcccagtacctggagcattggccgctgtcgcgctatgccgggcagatc
ggcgtcaccgaggcgcgcctcaacgatgtctgccggcgcatcgccgacctgccgtcgaaa
cgcctggtgtacgagcgcctgatgcaggagtccaagcgcctgctgctgttcaccgcccgc
tcggtgaatgaaatctgctaccagttggggttcaaggacccggcgtatttcagccggttc
ttccagcgctacgcgaagatgacgccgggggaataccgggcgcgccagggcgcggcgaaa
ccctggtcctga
DBGET
integrated database retrieval system
