Pseudomonas chlororaphis subsp. aurantiaca: JM49_15270
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Entry
JM49_15270 CDS
T03338
Name
(GenBank) TetR family transcriptional regulator
KO
K21962
TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_15270
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JM49_15270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
TetR_C_13
TetR_C_11
TetR_C_31
TetR_C_43
TetR_C_29
TetR_C_17
TetR_C_37
CMD
Dicers_N
Motif
Other DBs
NCBI-ProteinID:
AIS12969
LinkDB
All DBs
Position
3338508..3339197
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AA seq
229 aa
AA seq
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MHDSPLSPKSSGRQADGSKAKPAARRGRPVGNHDEKRTELLTAAIAVIAQDGYAGASMRK
VAQQAGCTTGAVTYYFANKEEMVTAVAQSLFDQIDTLLERQQEPIDIKSLIEQWLNWMSV
DEPNGWLAWFQLLAHARHEPAFAVVIKQRYARFRQVLTSMLETGQKQGKIRDDIAADLLA
DQISALSDGWMMMLPIEPERFTPARSQALFDAVITLISPPAPKSAEALR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcatgattctcccctctcccccaaaagcagcggccgtcaagcagacggcagcaaggcc
aagcctgccgcacggcgcgggcgtcccgtcggcaaccacgatgaaaaaagaaccgagttg
ctgaccgcggccatcgccgtgatcgcccaggacggctacgccggcgcctcgatgcgcaaa
gtggcgcagcaagccggatgcaccacgggcgcggtgacctactacttcgccaacaaggaa
gaaatggtcaccgcggtcgcgcagagcctgttcgaccagatcgacaccttgctggagcgc
cagcaggagccgatcgatatcaagtcgctcatcgagcaatggctgaactggatgagtgtc
gatgagcccaatggctggctcgcctggttccagttgctggcccatgccaggcacgaaccg
gcgttcgccgtcgtcatcaagcaacgctacgcacggttccgccaggtgctcacctcgatg
ctggagacgggccagaaacagggcaagatccgcgacgacatcgcagccgatctgctggcc
gaccagatcagcgccctcagcgacggctggatgatgatgctgcccatcgagcctgaacgg
ttcaccccggccagaagccaggcgctgttcgatgcggtcatcaccctgatctccccgccc
gcgccgaagagcgccgaggcgcttcgctag
DBGET
integrated database retrieval system
