Pseudomonas chlororaphis subsp. aurantiaca: JM49_17680
Help
Entry
JM49_17680 CDS
T03338
Name
(GenBank) C4-dicarboxylate ABC transporter permease
KO
K11690
TRAP-type transport system large permease protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JM49_17680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_17680
Transporters [BR:
pcp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JM49_17680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Bunya_G2
Amnionless
Motif
Other DBs
NCBI-ProteinID:
AIS13412
UniProt:
A0AAJ0ZH11
LinkDB
All DBs
Position
complement(3884065..3885348)
Genome browser
AA seq
427 aa
AA seq
DB search
MAILCLFLMLFVFMFLGVPIAISLGLAGATSILLFSPDSLSSLAIKLFETSEAYTLLAIP
FFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGS
IAVAGMVRSGYPREFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVVPGLL
LGVILMVVIYIVARIKKLPAQPRVSFREWLSTARRAFWGLLLLVIILGGIYSGLFTPTEA
AAVAAVYSAFVALFIYKDMRLRDCPKVLVESGRLSIMLMFIIANAMLFAHVLTTEQIPQQ
ITTFVMDAGLSPIGFLLMVNVVLLVAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGIV
MVVNMEIGLVHPPVGLNLFVTSAVTGLSLGQTIRAALPWLMILLAFLILVTYVPFISLAL
PNWLGMN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccattctctgcctgtttctgatgctgttcgtcttcatgttcctcggcgtgccgatc
gccatttccctggggctggccggcgccacctcgatcctgctgttcagcccggactccctg
agttccctggcgatcaagctgttcgaaacctccgaggcctacaccttgctggcgatcccg
ttcttcctgctgtccggggccttcatgaccaccggcggcgtggcgcagcgcctgatcgat
ttcgccaacgcctgcgtcgggcacatccgcggcggcctggcgattgccgcggtgctggcg
tgcatgctgttcgccgcgctgtcgggttcgtcgccggcaacggtggcggcggtgggctcg
attgccgtggcgggcatggtgcgctccggttacccgcgggagttcggcgccgggatcatc
tgcaacgccgggaccctgggcatcctgattccgccgtcgatcgtcatggtggtgtactcg
gcggccaccgaaacctcggtgggcaagctgttcatggccggggttgttccgggcctgctg
ctgggcgtgatcctgatggtggtgatctacatcgtcgcgcggatcaagaagctgccggcg
caaccgcgggtgtcgttccgcgaatggctgagcaccgcgcgccgggccttctggggcctg
ctgttgctggtgatcatcctcggcggcatctacagcggcctgttcaccccgaccgaagcg
gcggcggtggcggcggtgtattcagcgttcgtcgcgctgttcatctacaaggacatgcgc
ctgcgcgactgcccgaaagtgctggtggagtcgggccggctgtcgatcatgctgatgttc
atcatcgccaacgccatgctcttcgcccatgtgctgaccaccgaacagatcccgcagcag
atcaccaccttcgtcatggacgccgggctgtcgcccatcggtttcctgctgatggtcaac
gtggtgctgctggtggcgggcagcttcatggagccctcggccatcgtgctgatcctggcg
ccgatcttcttcccgatcgccatgaaactgggcatcgacccgatccacctgggcatcgtc
atggtggtcaacatggaaatcggcctggtgcatccgccggtgggcctgaacctgttcgtc
acctcggcggtgaccggcctgagcctgggccagaccatccgcgcggcgctgccgtggctg
atgatcctgctggcattcctgatcctggtgacctacgtgccgttcatttccctggcgctg
ccgaactggttggggatgaactga
DBGET
integrated database retrieval system
