Pseudomonas chlororaphis subsp. aurantiaca: JM49_18370
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Entry
JM49_18370 CDS
T03338
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_18370
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JM49_18370
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AIS13543
UniProt:
A0AAJ1E1W7
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All DBs
Position
complement(4042791..4043411)
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AA seq
206 aa
AA seq
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MGNHKIEIRRSNVEKILLAAEKVFAEKGFSGTAMADIAAEVQLPRSNLHYYFSTKSELYS
AVLLELLELWKQDALCFEMFDDPRVVLSSYIRAKMNHSRSRPYGSKVWANEIIHGAPTLG
EALDASLYDWAKMKEAKIRQWVEDQRILPVEPSSLLYMIWASTQHYADFDHQIMIINEHQ
PLSDMQFEKAVQTVTSVILRGIGLEP
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatcacaagatcgagatccgtcgcagcaacgtcgagaagatcctcctggcggcg
gaaaaggtattcgccgaaaaaggtttcagcggcaccgccatggccgatatcgccgccgaa
gtgcaattgccgcgctccaacctgcattactacttcagcaccaagagcgagctgtacagc
gcggtgctgctggagctgctggaactgtggaagcaggacgccctgtgcttcgagatgttc
gacgacccgcgggtggtgctcagcagctacatccgcgccaagatgaaccattcccgcagc
cggccctatggctcgaaagtctgggccaacgaaatcatccacggcgcgccgaccctgggc
gaggcgctggatgccagcctgtacgactgggcgaagatgaaggaagcgaagattcgtcag
tgggtcgaagaccaacgcatcctgccggtggagccgtcgagcctgctgtacatgatctgg
gcctcgacccagcactacgccgacttcgaccaccagatcatgatcatcaacgagcaccag
ccgctgtcggacatgcagttcgaaaaggcggtgcagaccgtgaccagcgtgattttgcgc
gggattgggttggagccctga
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integrated database retrieval system
