KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_19205
Entry
JM49_19205        CDS       T03338                                 
Name
(GenBank) LysR family transcriptional regulator
  KO
K17737  LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcp03000]
    JM49_19205
Transcription factors [BR:pcp03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    JM49_19205
SSDB
Motif
Pfam: LysR_substrate HTH_1 HTH_23 MarR_2 HTH_20
Other DBs
NCBI-ProteinID: AIS13701
LinkDB
Position
complement(4208138..4209043)
AA seq 301 aa
MTVKQIRAFLAVAQSLSFAVACERLHLSQSALSLTIKALEDGLGGRLFSRNTRNVALTPE
GEALVPLARRLIADWDNAEDELRQRFTLQRGRVTLAAMPSFAGNLLPPILKTFRARYPQV
NVTVNDVINEQVLEMVRDRQVELGVAFEPQQSASLQFTPLYIDRFVAVVPSDSPLANLKD
IDWQSLLEQPFITLQRPSTVRVMLEEHLLARQMKLPVEFESHQLATVGRMVASGLGVSAV
PALCAGQMRELGARCITLRDPVVERAIGVLTKPGHELSSAAQALFDILRGAGLAERLAVV
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgactgtcaaacagatccgcgcctttctggccgtggcccagagcctgagtttcgccgtg
gcctgcgagcgcctgcacctgtcgcagtcggccctgagcctgaccatcaaggcgctggag
gacggcctcggcgggcggctgttcagccgcaatacgcgcaatgtcgccctgaccccggaa
ggcgaggccctggtgcccctggcgcggcgcctgatcgccgactgggacaacgccgaggac
gagctgcgccagcgcttcaccctgcaacgcgggcgggtgaccctggcggccatgccatcc
tttgccggcaacctgctgccgccgatcctcaagacctttcgcgcgcgctacccgcaggtc
aacgtcacggtcaacgacgtgatcaacgagcaggtgctggaaatggtccgcgaccgccag
gtggaattgggggtggccttcgagccgcagcaaagcgcgtcgctgcaattcaccccgctg
tacatcgaccgtttcgtcgccgtggtgcccagcgattcgcccctggccaacctgaaggac
atcgactggcagtcgctgctggaacagccctttatcaccctgcaacggccgtccacggtg
cgggtgatgctcgaagagcatttgctggcgcgacagatgaagttgccggtggaattcgaa
agccatcagctggcgacggtgggacgcatggtcgccagcggccttggcgtgagcgcggtg
ccggccctgtgcgccgggcagatgcgcgagctgggcgcgcgctgcatcaccctgcgcgac
ccggtggtggaacgcgccatcggcgtgctgaccaagcccgggcatgaactgtcgagcgcg
gcccaggcgctgttcgacattttgcgcggggccggtctggccgagcgcctggcggtggtt
tcctag

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