Pseudomonas chlororaphis subsp. aurantiaca: JM49_19520
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Entry
JM49_19520 CDS
T03338
Name
(GenBank) transcriptional regulator
KO
K11474
GntR family transcriptional regulator, glc operon transcriptional activator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_19520
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
GntR family
JM49_19520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
HTH_36
LexA_DNA_bind
RepL
FadR_C
Rrf2
HTH_50
TrmB
Motif
Other DBs
NCBI-ProteinID:
AIS13762
UniProt:
A0AAJ0ZQ27
LinkDB
All DBs
Position
complement(4286501..4287265)
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AA seq
254 aa
AA seq
DB search
MHSKDSTRHQVADVVCERIERLIVDGVLKTGQLLPSERRLTEKLGVSRTALREGLKLLRA
RGIIETKQGKGSFVAQLSGQGATSALMHLFSSQPRTLYDLFEVRSLLEGESARLAALRGT
DADFVLIGRAYQALLDAHDQTLDASAHARLDHAFHLAICEASHNPVLVQTLRSLTDLLLN
SVFASVNNLYHRQAQKRQIDRQHARLYNAVTGRLPEQARKAAIAHIQGLCDNLREIENEE
QRLVRATLRLEGWN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcaaggattcgacccggcaccaggtggcggatgtggtctgtgaacgcatcgaa
cgcctgatcgtcgacggcgtactgaagaccggccaactgctgccctcggagcggcgcctc
acggaaaaactcggggtgtcgcgcacggccttgcgcgagggcctgaaactgctgcgggcg
cggggcatcatcgaaaccaagcagggcaagggctcgtttgtcgcccagttgtcggggcag
ggcgcgacctcggcgctgatgcatctgttcagctcccagccgcgcaccctctacgacctg
ttcgaagtgcgcagcctgctggaaggcgagtcggcgcggctggcggcgttgcgcggcacc
gacgccgatttcgtgctgatcggccgcgcctatcaggcgctgctggacgcccacgaccag
acccttgatgcctcggcccatgcgcggctggaccacgccttccacctggcgatctgcgag
gcctcgcacaacccggtgctggtgcagaccctgcgctcgctgaccgacctgctgctcaac
tcggtgttcgcctcggtcaacaacctctaccaccgccaggcgcagaaacgccagatcgac
cgccagcacgcgcggctctacaacgctgtcaccgggcgcctgccggagcaggcgcgcaag
gccgccatcgcgcatatccagggtctttgcgacaatctgcgggagatcgaaaacgaggag
cagcgcctggtgcgggcgaccttgcgcctggaaggctggaactga
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