Pseudomonas chlororaphis subsp. aurantiaca: JM49_20220
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Entry
JM49_20220 CDS
T03338
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_20220
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JM49_20220
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GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_6
3HCDH
Peptidase_A25
Motif
Other DBs
NCBI-ProteinID:
AIS13892
UniProt:
A0AAJ0ZIQ9
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All DBs
Position
complement(4425785..4426324)
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AA seq
179 aa
AA seq
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MNDKKAQTRERILQAASSALVQRGPAEPSVGEVMGAAGLTVGGFYAHFESKDALMLEAFS
QLLAQRRGLIADMDASLTGEERRALVAAFYLSRKHRDSTEQACPIPASVGEMGRLPDDFR
RVLNEHIELMLAQLATTPEDIDKALADLALMVGGLSLARALGAGELSDRLLRAAKSAVL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaaaaagctcaaacccgcgaacgcattctccaggccgccagctccgcgctg
gtgcaacgtggcccggccgagccgagcgtgggcgaagtgatgggcgccgcgggcctgacg
gtcggtggcttctacgcgcatttcgaaagcaaggacgcgctgatgctggaagcgttcagc
caattgctggcccagcgccggggcctgatcgccgatatggatgcgtcgttgaccggcgaa
gagcgacgagcgctggtggcggcgttctacctgtcacgcaaacaccgcgattccaccgag
caggcctgcccgatccccgcatcggtcggtgagatggggcgcctgccggatgacttccgc
agagtcctgaatgagcacatcgagctgatgctggctcagttggcgaccacgcctgaagac
atcgacaaggccctggccgacctggccctgatggtgggtggcttgtccctggcccgggcg
ttgggagccggtgagctgtcggaccgtttactgcgcgctgccaagtcggcggtgctatga
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