Pseudomonas chlororaphis subsp. aurantiaca: JM49_20445
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Entry
JM49_20445 CDS
T03338
Name
(GenBank) helicase
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SWIM
DEAD
ResIII
PI3K_p85B
DUF5624
Motif
Other DBs
NCBI-ProteinID:
AIS13931
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Position
4471011..4473704
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AA seq
897 aa
AA seq
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MPPTLTKPLAPSWVSRFKEQALERGRRYALENRVRIVQAGDSIITASCEGSGSNVYRQTI
SLRESAKNTLLMVEASCTCPVRSNCKHIAAVLLKIEETLAYPAAAKDAELLEKLQAVLEN
RSPAPLPQQIVDNVQPVPRLWLASIEFSAFEPRNGKMQRYIQHRAALSFSYLEEYVSGQK
NADVVIRQEHQTLRIKRHPEVEQRYREQLRALGFKIATRQSKALPESAGELYEMVNDSAW
LTFTLNELPKLRTQGWELQIDDDFGFDLTAVDDWYATVDEAPGRDWFDLELGIIVNGERL
SLLPILLNLMRSHTEILNPERLAKRRDDELILVNIPGRPNSPNGPLQVALPYGRLKPVLA
TLGEFYLQEPGETTLRLSSADATRLNPLEDLPLLWEGGEHIRSFAQRLRDIKDYSAPAPD
GLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHVLSEKNAGRLDRPCMV
VMPTSLIPNWLDEAAHFTPQLRVLALYGAGRRKYFPRLADYDLILTTYALLPKDVEQLAA
LPLHVLVLDEAQYIKNPSSKAAQAARALNTRQRLCLSGTPLENHLGELWSLFHFLLPGWL
GDVKSFNRDYRAPIEKHASEVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVELNE
AQRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNEDAVPTRGS
SSGKLDSLMEMLEELFDEGRRILLFSQFTSMLSLIEAELKRRNVAYALLTGQTRDRRTPV
RDFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFV
YKLIARGTVEEKIQHLQQEKSDLAAGVLDGRKAGDWKLQSEDIEALFAPLPDKKGGR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaccctgaccaaacccctggcaccttcctgggtcagccgattcaaggaacaa
gccctggagcgtggccgccgctacgccctggagaaccgcgtcaggatcgtccaggccggc
gacagcatcatcaccgccagttgcgaaggttcggggagcaacgtctatcgacagaccatc
agcctgcgcgagtcggccaagaacaccttgctgatggtcgaagcctcctgcacctgcccg
gtgcgcagcaactgcaaacacatcgccgcagtgctgctgaaaatcgaggaaaccctggcc
tacccggcggcagcgaaagacgccgagctgctggaaaagctccaggctgtgctggagaac
cgcagccccgccccgctgccgcaacagatcgtcgacaacgtgcagccggtaccccgactg
tggctggccagcatcgagttcagcgccttcgaaccgcgcaacggcaagatgcaacgctac
atccagcaccgtgccgcactgtcgttcagctacctggaggaatacgtcagcgggcagaaa
aacgccgacgtggtgattcgccaggaacaccagaccctgcgcatcaagcgccatccggaa
gtcgaacaacgctatcgcgaacagttgcgggccttgggcttcaagatcgccacccggcag
agcaaggccctgccggaaagcgccggcgagctgtatgaaatggtcaacgacagcgcctgg
ctgaccttcaccctcaacgaattgcccaagctgcgcacccagggttgggaactacagatc
gacgacgacttcggcttcgacctgaccgccgtggacgactggtacgccacggtggacgaa
gcgccggggcgcgactggttcgacctggaactgggcatcatcgtcaacggcgagcgcctg
agcctgctgccgatcctgctcaacctgatgcgctcccacaccgagatcctcaacccggaa
cgcctggccaaacgccgggatgacgagctgatcctggtgaacattcccgggcgtcccaac
tcgcccaacggccccctgcaagtggcgctgccctatggccggctaaagccggtgctggcc
accctcggtgagttctacctgcaagagcccggcgaaaccacactgcgcctgagcagtgcc
gacgcgacccgcctcaatccgctggaagacctgcccctgctctgggagggcggcgaacat
atccgctccttcgcccaacggctgcgggatatcaaggattactcggcccccgcgccggac
ggcctgaacgccaccttgcgcccctatcaactcgaaggcctgagctggatgcagtccctg
cgccagctggaagtcggcggcatcctggccgacgacatgggcctgggcaaaaccctgcag
accctggcccacgtgctcagcgaaaagaacgccgggcgcctggatcggccgtgcatggtg
gtgatgcccaccagcctgatccccaactggctcgacgaggcagcgcacttcacgccgcag
ctcagggtcctggccctgtatggcgccggccgcaggaagtacttcccccggctggccgac
tacgacctgatcctgaccacctacgcgctgctacccaaggatgtcgagcagctcgccgcc
ctgcccctgcatgtcctggtgctggatgaggcgcaatacatcaagaacccgtcgagcaag
gcggcccaggccgcgcgcgcgctcaacacccggcagcgcctgtgcctgagcggcacgccg
ctggagaatcacctgggcgagctgtggtcgctgttccatttcctgctgcccggctggctg
ggggacgtgaagagtttcaatcgcgactaccgcgcgccgatcgaaaagcacgccagcgaa
gtacgcctgcagcacctcaacgggcggatcaagcccttcctgttgcgccgcaccaaggaa
caggtggccaccgagctgccgcccaagaccgagatcatccattgggtggaactcaatgaa
gcccagcgcgatgtgtacgaaaccatgcgcctggccatggacaagaaagtccgagacgag
atcacccgcaagggcgtggcccgcagccagatcatcattctcgaggcgctgctgaaactg
cgccaggtgtgttgcgacctgcgcctggtcaacgaagacgcggtgccgacgcgaggcagc
tcctccggcaagctcgacagcctgatggagatgctcgaggagctgttcgacgagggccgg
cgcatcctgctgttctcgcaattcacctcgatgctgagcctgatcgaggccgagctgaag
cggcgcaacgtcgcctacgccctgctgaccgggcagacccgcgatcgccgcacgccggtc
agggacttccagagcggcaagctgcaaatcttcctgatcagcctgaaagccggcggcgtc
ggcctcaacctgaccgaagccgataccgtgatccactacgacccgtggtggaacccggcc
acggaaaaccaggccaccgaccgcgcctatcggatcggccaggagaagccagtgtttgtc
tacaagctgattgcccgcggcacggtggaagagaaaatccagcacctgcagcaggagaag
tccgacctggcggcgggcgtgctggatgggcgcaaggccggggactggaagctgcagagc
gaagacatcgaagccctcttcgccccgctgcccgacaagaaaggcggacgctga
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