Pseudomonas chlororaphis subsp. aurantiaca: JM49_20500
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Entry
JM49_20500 CDS
T03338
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00071
Fatty acid degradation
pcp00280
Valine, leucine and isoleucine degradation
pcp00310
Lysine degradation
pcp00362
Benzoate degradation
pcp00380
Tryptophan metabolism
pcp00410
beta-Alanine metabolism
pcp00640
Propanoate metabolism
pcp00650
Butanoate metabolism
pcp00907
Pinene, camphor and geraniol degradation
pcp00930
Caprolactam degradation
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
pcp01120
Microbial metabolism in diverse environments
pcp01200
Carbon metabolism
pcp01212
Fatty acid metabolism
Module
pcp_M00087
beta-Oxidation
pcp_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JM49_20500 (fadB)
00650 Butanoate metabolism
JM49_20500 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JM49_20500 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JM49_20500 (fadB)
00310 Lysine degradation
JM49_20500 (fadB)
00380 Tryptophan metabolism
JM49_20500 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JM49_20500 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JM49_20500 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JM49_20500 (fadB)
00930 Caprolactam degradation
JM49_20500 (fadB)
Enzymes [BR:
pcp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JM49_20500 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JM49_20500 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JM49_20500 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JM49_20500 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIS13942
LinkDB
All DBs
Position
complement(4483360..4485507)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRSAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSSSAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAHDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAAFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaattg
cgttcggccgtagacgccatcaaggcagatgcgtcggtcaagggtgtgatcgtcagcagt
ggcaaggacgtcttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgcagagcttgtcgcaggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgttccaaccgttgccgcgatcaatggcatcgcgctgggcggcggtctggaa
atgtgcctggcagctgactatcgcgtcatgtcctccagcgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggcttcggcggtactgttcgcctgccacgcatcatcggt
gccgacaacgccatcgaatggattgccgccggcaaggaaaaccgtgccgaagacgcactg
aaagtcggcgctgtcgacgctgtcgtcgccccggaaaaactccatgaagcggctctggcc
accgtcaagcgcgccatctccggcgagttcgactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctcaacgccatcgaacagatgatgtccttcgaaaccgccaagggtttt
gtcgccggccaggctggcccgaactacccggcgccggtcgaggccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcgctggaagtcgaggccacgggcttcgtcaag
ctggccaagacttctgccgcgcagagcctgatcggtctgttcctgaacgaccaggaactg
aagaaaaaggccaaggcctacgacgaaatcgcccacgatgtgaagcaggccgccgtactc
ggtgccggcatcatgggtggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggtatcgagcaaggcctggcggaagccgccaagctg
ctggtcggccgtgtcgataaaggtcgcatgaccgcggcgaagatggccgaagtgctcaac
ggcattcgcccaacgctgtcctacggtgacttcggccacgtcgacctggtggtcgaagcg
gtcgtcgagaaccctaaggtcaagcaagcggttctggccgaagtcgaagaccaggtcaaa
gaggacaccatcctcgcttcgaatacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgcct
ctggtcgaagtcatccgtggcgagaagtccagtgagctggccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccaatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccatggtcgtgacgtgatggccgaaggtttc
ccggatcgcatgaaagacgatcgccgttcggctatcgatgtgctctacgaagccaagcgt
ctgggccagaagaacggcaagggtttttacgcctacgaggccgacaagaaaggcaagcag
aagaaagtggccgacccgtcggtgctggaagtgctcaagcctatcgtgtacgagcagcgt
gaagtcactgatgaggacatcgtcaactggatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcattgtcgagaccgcggccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtt
gccgcgttcgttgccctggccgaccagtacgccgatctgggcgcgctgtaccacccgacc
gcgaagctgcgcgagatggccaagaacggccagagcttcttcggttaa
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