Pseudomonas chlororaphis subsp. aurantiaca: JM49_20525
Help
Entry
JM49_20525 CDS
T03338
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_20525
Transporters [BR:
pcp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JM49_20525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
Guanylate_kin
Motif
Other DBs
NCBI-ProteinID:
AIS13947
LinkDB
All DBs
Position
complement(4491262..4493028)
Genome browser
AA seq
588 aa
AA seq
DB search
MLSSRQRRAIRLASRFIAPYRWQALGALLALVVTAGITLSMGQGIRLLVDQGFMTGSPDL
LNQSIGLFLLLVLGLAVGTFVRFYLVSWIGERCVADIRRQVFNHLIYLHPGFYENNRSSE
IQSRLTADTTLLQSVIGSSLSLFLRNALMVIGGIVLLFVTNPKLTSIVVIALPLVLVPIL
IFGRRVRSLSRLSQDRIADVGSYVAETLGQIKTVQAYNHQPQDERRFALTVEEAFNTARR
RIVQRAWLITLVIVLVLGAVGVMLWVGGMDVIAGRISSGELAAFVFYSLIVGSAFGTLSE
VIGELQRAAGAAERIAELLRSENLIQPPSDGLASLPERVRGELVLENLRFSYPSRPDSYA
VDGLSLTVREGETLALVGPSGAGKSTIYDLLLRFYDPEQGRILLDGVPLTRLDPQDVRRC
FALVSQSPALFFGSIEENIRYGKPSATPEQVREAARIAYAHDFIEKMPEGYQTHLGDAGL
GLSGGQRQRLAIARALLVDAPILLLDEATSALDAQSEHLIQQALPSLMKNRTTLVIAHRL
ATVKNADRIAVMDQGRLVAVGTHQELIASNPLYARLAALQFSDGQAAS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgctttcttcgcgtcaacgccgggcgattcgcctggccagtcgtttcatcgcgccttat
cgctggcaggccctgggggcattgctggcgctggtggtgaccgcgggcatcaccctgtcc
atggggcagggcatccgcctgttggtggaccagggcttcatgaccggatcaccggacctg
ctcaaccagtccatcggcctgtttctgctgctggtgctggggctggcggtggggacgttc
gtgcgtttctacctggtgtcatggattggcgagcgctgcgtggcggatatccgtcggcag
gtgttcaaccatctgatctacctgcacccgggcttctatgagaacaatcgcagctcggag
atccagtcgcggctgaccgccgacactaccttgctgcaatcggtgatcggctcgtcgctc
tcgctgtttttgcgcaatgcgctgatggtcatcggcggcatcgtgctgctattcgtcacc
aaccccaagctcaccagcatcgtggtgatcgccttgcccctggtgttggtgccgatcctg
attttcggccgccgggtgcgtagcttgtcacgcttgagccaggaccgtatcgccgatgtc
ggcagttacgtggcggaaaccctgggccagatcaagaccgtccaggcctataaccaccag
ccccaggatgagcggcgtttcgccctgacggtggaggaggcgttcaacaccgcacgccgg
cgtatcgtccagcgtgcctggctgatcaccctggtgatcgtactggtgctgggcgcggtc
ggggtgatgctctgggtcggcggtatggacgtgattgccgggcgcatttccagtggcgag
ctggcggcctttgtcttctacagcctgatcgtcggcagtgccttcggcaccctgagcgaa
gtgatcggcgagctgcaacgggctgccggcgcggcggagcggattgccgagttgctgcgt
tcggaaaacctgatccagccgccgagcgacggcctggccagcttgcccgagcgggtgcgg
ggcgagctggtgctggagaacctgcgcttttcttatccatcacgtccggacagttatgcc
gtcgatggcctgagcctgacggtccgcgagggggaaaccctggcgctggtcgggccgtcg
ggggcgggcaagtcgaccatctatgatctgctgctgcgcttctacgacccggagcaggga
cgcatcctgctcgatggcgtgcccttgactcggctcgacccgcaggacgtgcggcgctgt
tttgccctggtgtcgcaaagcccggcgctgttcttcggcagcatcgaggagaacattcgt
tatggcaaaccctcggccaccccggagcaggtcagggaggcagccaggatcgcctacgcc
catgacttcatcgagaaaatgcccgagggttaccagacccatctcggcgatgcggggctg
gggctttccggcggccagcgccagcgcctggcgattgcccgggcactactggtggacgcg
ccgatcctgttgctggatgaagccaccagcgccctggatgcccagagcgagcatttgatc
cagcaggccttgccgagcctgatgaagaatcgcaccaccctggtgatcgcccatcgcctg
gccacggtgaaaaacgccgaccggatcgcggtgatggatcaggggcggctggtggcggtg
ggtactcaccaggagttgatcgccagcaatccgctgtatgcgcgtctggcggcgttgcag
ttcagcgatggccaggctgcctcctga
DBGET
integrated database retrieval system
