Pseudomonas chlororaphis subsp. aurantiaca: JM49_20690
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Entry
JM49_20690 CDS
T03338
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03030
DNA replication
pcp03430
Mismatch repair
pcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JM49_20690
03430 Mismatch repair
JM49_20690
03440 Homologous recombination
JM49_20690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcp03032
]
JM49_20690
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_20690
Enzymes [BR:
pcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JM49_20690
DNA replication proteins [BR:
pcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JM49_20690
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JM49_20690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
TIP49
AAA_18
AAA_30
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
HasA
Rad17
Mg_chelatase
SKI
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AIS13979
LinkDB
All DBs
Position
complement(4524667..4526775)
Genome browser
AA seq
702 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVYDVLHALINGDAKALLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPD
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSADAPRQPLKPVGISQATVDSAQSVAGAAVAAPVSVAAAPVAAPVVEAAPAVAPVVAP
APVPAAPVAPAPQPVVETPAQAAPVAAEEVVDLPWNDPVEPVVAQQPAVEPMLETAAEQP
ELTPMPTPTPDSVVPDAPEWVSAPVPEPSVAEVDAATPGIDLDDEPPLDEDYIEPDMDSA
YSYLDELASEHTADPEPEPEPLPAAQPATGLALEWLELFPKLPISGMTASIAANCTLIAA
EGDNWLLHLDPAHSALFNATQQRRLNDALNQYHQRTLTVSIELIKPEQETPAQAASRRRA
NRQREAEESIHGDPFIQQMVREFGAVVRHDTIEPVEALVSQG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgtttcgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagtcagcggctgcaccatgcc
tatctgtttaccggcacccgcggggtgggcaagaccaccatcgcgcggatcattgccaaa
tgcctgaactgtgaaacaggcattacttccacgccctgtggcacctgctcggtatgccgc
gagatcgacgaagggcgtttcgtcgacctgatcgagatcgacgccgcgagccggaccaag
gtcgaggacacccgcgagctgctggacaacgtgcagtacgcaccgagccgcggacgcttc
aaggtctacctgatcgacgaagtgcacatgctgtccagccactcgttcaacgccttgttg
aagaccctggaagagccgccgccctacgtcaaattcattctggcgaccaccgacccgcag
aaacttccggcaacgattctttcgcgctgcctgcagttctccctgaagaacatgaccccg
gagcgggtggtcgagcacctgacccacgtgctgggcgtcgagaacgtgccgttcgaagac
gacgcgctgtggttgttgggccgcgccgccgacggttcgatgcgcgatgccatgagcctc
accgaccaggccatcgccttcggtgaaggcaaggtcatggctgccgatgtacgggcgatg
ctcggcaccctcgatcacggccaggtctacgacgtcctgcatgcgctgatcaatggcgat
gccaaggccttgctcgaggctgtgcgtcacctggccgaacagggcccggactggaatggc
gtgctgtcggagattctcaatgtcctgcaccgcgtggccattgcccaggccttgccggac
ggtgtcgacaacgggcatggcgaccgcgaccgggtgctggccctggcccaggcgttgccg
gccgaagatgtgcagttctattaccagatgggcctgatcggccggcgtgacctgccgctg
gcgccggacccgcgcggtggtttcgagatggtcctgctgcggatgctcgccttccggcca
gcggactcggcagatgcgccgagacagccgctaaagccagtggggatcagccaggccaca
gttgattccgcccaatccgtggctggcgcagccgttgctgctccggtaagtgttgccgcc
gcgccggttgcggcgccggtggtcgaggccgctccggcggttgcccctgtcgttgcaccc
gcgcctgttccagctgcgcccgtggcgcctgcgccacagcctgtggtcgagacgccagcg
caagccgcgcctgtcgccgccgaagaggtggtcgacctgccgtggaacgacccggtcgaa
ccggtcgtcgcacagcagccggccgtcgagcccatgctggagaccgccgcggagcagcct
gagctgaccccgatgccgaccccgaccccggacagcgtagtgccggatgcgccggaatgg
gtcagtgccccagtgccggagcccagcgttgccgaggtcgatgctgcgacaccgggcatc
gacctggatgacgagccgccgctggacgaagactacatcgagccggacatggattcggcc
tacagctacctggacgaactggccagcgaacacaccgccgatcccgagccggaacccgag
ccgctgccggctgcccagccggccacaggcctggcgctggagtggctggagctgttcccg
aaactgccgatttccgggatgacggcgagcatcgccgccaactgcaccttgatcgccgcc
gagggcgacaactggttgttgcacctggatccggcccacagcgccctgttcaacgccact
cagcagcggcgcctgaacgatgccctgaaccagtatcaccagcgcacgctgacggtgagc
atcgagctgatcaagcccgagcaggaaaccccggcccaggccgcgtcgcgtcgccgtgcc
aatcgccagcgcgaagccgaggagtcgatccacggcgatccgttcatccagcagatggtg
cgggagttcggcgcggtggtccgtcacgatactattgaacctgtcgaggccctggtcagc
cagggttaa
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