Pseudomonas chlororaphis subsp. aurantiaca: JM49_20850
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Entry
JM49_20850 CDS
T03338
Name
(GenBank) porin
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_20850
Transporters [BR:
pcp02000
]
Other transporters
Pores ion channels [TC:
1
]
JM49_20850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
OmpW
Motif
Other DBs
NCBI-ProteinID:
AIS14011
UniProt:
A0AAJ0ZIH9
LinkDB
All DBs
Position
complement(4573228..4574214)
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AA seq
328 aa
AA seq
DB search
MKLKNTLGIAIGSIVAVTSFGVLAQGQGAVEGELFYKKQYNDSVKHIEDGFNPGARIGYF
LTDDLSLDLNYDKTNHTRSNDGTGNQKIKGDTGSLLATYHFGQAGVDSLRPYVSGGFGHQ
SRTNVLADGHSGRDQSTLAIIGTGVKYYFTDNLFARAGVEADYAMDNGKWDYSALVGLGV
NFGGNAGKVAPAPAPVPEPTPEPEAPVAEVVRVELDVKFDFDKSVVKPNSYADIKNLADF
MKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTSQYGVESSRVQSVGYGESRP
VADNATEAGRAVNRRVEAQVEAQAQQAQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaacaccttgggcattgccattggttctattgttgccgtgacttcgttc
ggcgttctggcgcaaggccaaggcgcggtcgagggtgaactgttttacaaaaaacagtac
aacgacagcgttaagcacatcgaagacggcttcaacccaggcgctcgtatcggctacttc
ctgaccgatgacctgtcgttggacctgaactacgacaaaaccaaccacacccgttcgaac
gacggcactggcaaccagaagatcaaaggtgacaccggcagcctgctggctacctaccac
ttcggtcaagctggcgtggactccctgcgtccatacgtttcgggtggtttcggtcaccag
agccgtaccaacgtcctggctgacggccacagcggtcgcgaccagtcgaccctggctatc
atcggtaccggtgttaagtactacttcaccgacaacctgttcgctcgtgccggcgttgaa
gccgactacgcaatggacaacggcaagtgggactactccgctctggttggtctgggtgtg
aacttcggcggcaacgctggcaaggttgctccagctcctgctccagttccagagccaact
ccagaaccagaagctccggttgctgaagttgttcgtgttgagctggacgtgaagttcgac
ttcgacaagtcggtcgttaagcctaacagctacgctgacatcaagaacctcgctgacttc
atgaagcagtacccacaaaccaccaccgttgttgaaggtcacactgactccgtcggtcct
gacgcttacaaccagaaactgtctgagcgtcgtgcaaacgccgttaagcaagttctgacc
agccagtacggtgttgagtcgagccgcgttcaatccgttggttacggtgagtcccgccca
gttgctgacaacgcaactgaagctggccgcgctgtaaaccgtcgcgtagaagcgcaggtt
gaagcacaagctcaacaagctcagtaa
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