Pseudomonas chlororaphis subsp. aurantiaca: JM49_21015
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Entry
JM49_21015 CDS
T03338
Name
(GenBank) DNA-binding protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
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GFIT
Motif
Pfam:
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_25
MarR
Motif
Other DBs
NCBI-ProteinID:
AIS14043
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Position
4609356..4610471
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AA seq
371 aa
AA seq
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MNAVFDGASLRLARVFSGLALEEVAEKVGKTRQYLHKLETGQGTPTEQLMGDLAEALDVE
VGFFASKSHRLNEDQFHFRKLLTTKSTIKQVAIARGEMVDALIKFLDQELQLPRVSIPSL
PNSQTFDDVERAAEYCRREWDLGLGPIANMTRLVENLGAVVTTFQGVSKEIDALSVSVER
PFIVRNTAKESACRQRFDIAHELGHLVMHEGVVTGDRITENQANRFASALLLPRSMMAKL
FPRPTGTRLDWKGIKEFKLTWKVSKAGILYRARQLDLITEGQYKTGVITLRKYGETNGER
EDDLIAQEPPEMLARSLFILAEKKGINAQEIAKALHVKPAFLRELAGLESLATSSQQQIR
TQAPTHLRLVK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgttttcgacggagcatctctcagactagcccgcgttttcagcgggctagct
cttgaagaggtagcagaaaaggtaggcaaaacacgccaatacctacataagcttgagaca
ggccagggaacgcctaccgagcaattgatgggcgaccttgctgaagctttagatgtggag
gttggtttctttgcgtccaaatcacacagactgaatgaggaccaattccatttcagaaaa
ctgctgaccaccaaaagcacgatcaagcaggtagcaattgccagaggcgagatggttgac
gccttgatcaagtttcttgatcaagagctacaactacctcgagtcagtattcctagcctg
cctaactcgcaaacatttgatgatgtagagcgggcagcagagtactgccgtagggaatgg
gatctagggcttggccctattgcgaatatgactcgtcttgtagagaacctaggcgcggtt
gtaaccactttccaaggagtgtccaaagagatcgatgctctctctgtgtctgtagaaagg
ccattcattgtccgaaacacagccaaagagagtgcttgtcgccagcggtttgacattgct
catgaactgggtcatttggtcatgcacgaaggagtggtgacaggggataggatcactgag
aaccaagccaatagattcgcaagtgccctacttctacctcgctccatgatggcaaaactg
tttccacgacccacaggaacaaggctcgactggaaaggcataaaggaattcaagctcacc
tggaaggtcagcaaagctggcattctctatagggcgcgacagctcgatctcatcaccgaa
ggccaatataagaccggggtaataaccttgagaaaatacggggaaacgaacggtgagcga
gaggacgacttgatagcccaagagccgcctgaaatgcttgcaaggtcgctgtttattttg
gccgagaaaaaagggatcaatgcgcaagagatagctaaagcattgcacgtaaaacccgcg
ttccttcgtgagttggcaggactggaatcattagccacttcctcccagcagcagatccgc
acccaagcaccaacacacttacgccttgtcaagtaa
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