Pseudomonas chlororaphis subsp. aurantiaca: JM49_21575
Help
Entry
JM49_21575 CDS
T03338
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00061
Fatty acid biosynthesis
pcp00071
Fatty acid degradation
pcp01100
Metabolic pathways
pcp01212
Fatty acid metabolism
pcp02024
Quorum sensing
pcp04146
Peroxisome
Module
pcp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JM49_21575
00071 Fatty acid degradation
JM49_21575
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JM49_21575
09145 Cellular community - prokaryotes
02024 Quorum sensing
JM49_21575
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcp01004
]
JM49_21575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcp04147
]
JM49_21575
Enzymes [BR:
pcp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JM49_21575
Lipid biosynthesis proteins [BR:
pcp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JM49_21575
Exosome [BR:
pcp04147
]
Exosomal proteins
Exosomal proteins of breast milk
JM49_21575
Exosomal proteins of breast cancer cells
JM49_21575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AIS14145
LinkDB
All DBs
Position
complement(4720961..4722628)
Genome browser
AA seq
555 aa
AA seq
DB search
MSAAFRLPLEVFYEREARHPRQRFLVQPLGGGRVEELTWADVGHQARCAAHWLRARELPP
GSHVAIISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAQVLEHSESALVFIGKLDDW
PAMAPGVKPGLPTISLPICPEGRFDFTWDQLQQCSPIQDDPNPAAEQLATIIYTSGTTGL
PKGVMHSFGTLGFAATRGTQLFGLGPTDRLLSYLPLCHVAERMFVELAAIYTGQTVFFAE
SLETFLTDLQRARPTAMFGVPRIWTKFQMGVYSKVPAKRLDFLLGLPFIGKRVGQKVLAG
LGLDALRVALSGAAPVPQTLLDWYQRLGLDVLEVYGMTESCGYSHIGRSGQHVPGWIGRP
CPDVEVRIDEAGEVQVRSGATMLGYFKDPQKTAETVTADGFLRTGDKGEQDADGNLRLTG
RLKEIFKTSKGKYVAPAPIENRLAVHSRIEQVCVVGDGLSAPLGLCVLSAAGLQDAAGGA
RGGLHASLESLLDEVNGALDKHERLHRLVVVKDSWAVENGFLTPTLKIKRNVIEATYGER
FKEWSERSEAVLWQD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcttttcgtttgccgctggaagtgttctacgagcgcgaagctcgtcatccc
cgccaacgtttcctggtccagcccctgggtggtggccgggtcgaagagctgacctgggcc
gacgtcggccaccaggcccgctgcgccgcccactggctgcgcgcccgcgagctgccgccg
ggcagtcatgtagcgatcatttccaagaactgcgcccactggatcatcgccgacctggcg
atctggatggccggtcacgtttccgtgccgctgtatcccaacctgaccgccgattcggtg
gcccaggtgctggagcattccgaatcggccctggtgttcatcggcaagctggatgactgg
ccggcgatggccccgggggtgaaacccgggctgccgaccatcagcctgccgatctgcccc
gaaggccgcttcgacttcacctgggaccagttgcagcagtgctcgccaatccaggacgac
cccaaccccgccgccgagcaactagcgaccatcatttacacctcaggcaccaccggcctg
cccaagggcgtgatgcacagcttcggcaccctgggctttgcggcgacccgcggcacccag
ctgttcggcctcgggccgacggaccggctgctgtcctacctgccgctgtgccatgtggcc
gagcgcatgttcgtcgagctggcggcgatctataccgggcagacggtgttctttgccgag
agcctggagacctttctcaccgacctgcagcgggcgcggcccacggcgatgttcggcgta
ccgcggatctggaccaagttccagatgggcgtgtacagcaaggtcccggccaagcgcctg
gacttcctgttgggcctgccgttcatcggcaagcgggtcgggcagaaggtgctggccggg
ctggggctggatgcgctgcgggtcgccttgtccggcgccgcaccggtgccgcagactctg
ttggactggtaccagcgcctgggcctcgacgtgctggaggtgtacggcatgaccgaaagt
tgcggttattcccacatcggccgcagcggccagcatgtacccggctggatcggccggcct
tgcccggacgtcgaggtgcggatcgacgaggccggagaggtccaggtgcgtagcggggcg
accatgctcggctacttcaaggacccgcagaagaccgcggaaaccgtcaccgcggatggt
ttcctgcgtaccggcgacaagggcgagcaggacgccgacggcaatctgcgcctgaccggg
cggctcaaggagatcttcaagaccagcaagggcaagtacgtggccccggcgccgatcgag
aaccggctggcggtgcattcgcggatcgagcaggtgtgcgtggtcggcgatggcctgagt
gcgccgctgggcctgtgcgtgttgtccgcggccggtttgcaggatgccgccggcggcgcc
cgtggcggcctgcatgcgagtctggaaagcctgctcgatgaggtcaacggcgcgctcgac
aaacatgagcgcttgcaccgcctggtggtggtgaaggacagttgggcggtggaaaacggc
tttctgaccccgaccctgaagatcaagcgcaatgtcatcgaagccacctacggcgagcgc
ttcaaagagtggagcgagcgctccgaagcggtgctgtggcaggattga
DBGET
integrated database retrieval system
