Pseudomonas chlororaphis subsp. aurantiaca: JM49_21850
Help
Entry
JM49_21850 CDS
T03338
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_21850
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JM49_21850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
GTP_CH_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AIS14197
UniProt:
A0AAJ1E1G0
LinkDB
All DBs
Position
4782408..4783016
Genome browser
AA seq
202 aa
AA seq
DB search
MSTIRERNKELILRAASEEFADKGFAATKTSDIAAKAGLPKPNVYYYFKSKENLYREVLE
SIIEPILQASTPFNADGVPSEVLSGYIRSKIRISRDLPFASKVFASEIMHGAPHLSPDQV
EQLNAQAKHNIDCIQTWIDRGQIAPIDPHHLMFSIWAATQTYADFDWQISVVTGKAKLDE
SDYEAAAQTIIRLVLKGCETDQ
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatccgcgagcgcaacaaagaactgatcctgcgtgccgccagtgaagagttt
gccgacaaaggcttcgctgcgaccaaaaccagcgacatcgcggccaaggcggggctgccc
aaacccaacgtctactactacttcaaatccaaggaaaacctctaccgcgaggtcctggaa
agcatcatcgagccgatcctccaggcttcgaccccgttcaacgccgacggcgtgcccagc
gaagtactgagcggctacatccgctcgaagatccgcatctcccgcgacctgcccttcgcc
tccaaggtgttcgccagcgagatcatgcacggtgccccgcacctgagcccggaccaggtc
gagcagctcaacgcccaggccaagcacaacatcgattgcatccagacctggatcgatcgt
ggccagatcgcgcccatcgacccgcaccacctgatgttcagcatctgggccgcgacccag
acctacgccgacttcgactggcaaatctcggtggtgaccggcaaggccaagctggacgag
tccgattacgaagccgccgcccagaccatcatccgcctggtgctcaagggctgcgaaacg
gaccagtaa
DBGET
integrated database retrieval system
